CFinderM000646's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
ion transport,0.012729693GO:0006811
Ubiquitin_mediated_proteolysis0.033507295KEGG
membrane,0.038248123GO:0016020

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000154G1380Protein of unknown function (DUF3527)AT5G59020 (7.80E-37)
PH01000274G0530ubiquiting-conjugating enzyme 2AT2G02760 (2.50E-82)
PH01000625G0460-- (-)
PH01000736G0120Regulator of chromosome condensation (RCC1) family proteinAT3G15430 (2.00E-152)
PH01001115G0490Protein of unknown function (DUF3527)AT2G29510 (4.60E-42)
PH01002317G0040ABC-2 type transporter family proteinAT2G28070 (0.00E+00)
PH01003486G0160potassium channel in Arabidopsis thaliana 2AT4G18290 (4.00E-168)
PH01004926G0040Tetratricopeptide repeat (TPR)-like superfamily proteinAT3G15200 (6.20E-39)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000031details
CFinderM000377ARR-B Transcription_Regulator(from PlantTFDB)
details
CFinderM000473details
CFinderM000671SET Transcription_Regulator(from iTAK)
DNA repair,
Base_excision_repair
nuclease activity,
Ubiquitin_mediated_proteolysis
details
CFinderM000846TALE Transcription_Regulator(from PlantTFDB)
HB-other Transcription_Regulator(from PlantTFDB)
Peroxisome
details
CFinderM000954defense response,
ADP_binding
acid phosphatase activity,
Ubiquitin_mediated_proteolysis
acid-amino acid ligase activity,
details
CFinderM001120Valine,_leucine_and_isoleucine_biosynthesis
Glycine,_serine_and_threonine_metabolism
isoleucine biosynthetic process,
L-threonine ammonia-lyase activity,
cellular amino acid metabolic process,
details
CFinderM001301TALE Transcription_Regulator(from PlantTFDB)
SBP Transcription_Regulator(from PlantTFDB)
HB-other Transcription_Regulator(from PlantTFDB)
glycogen biosynthetic process,
regulation of actin filament polymerization,
cytoskeleton,
details
CFinderM001492mitochondrial inner membrane,
mitochondrial inner membrane presequence translocase complex,
nucleolus,
Ubiquitin_mediated_proteolysis
ribosome biogenesis,
details
CFinderM001633TALE Transcription_Regulator(from PlantTFDB)
HB-other Transcription_Regulator(from PlantTFDB)
Peroxisome
details
CFinderM001839GPI anchor metabolic process,
DNA methylation,
DNA recombination,
Base_excision_repair
Ubiquitin_mediated_proteolysis
details
CFinderM001869DNA recombination,
(1->3)-beta-D-glucan biosynthetic process,
1,3-beta-D-glucan synthase complex,
Ubiquitin_mediated_proteolysis
details
CFinderM001880RNA_transport
C2H2 Transcription_Regulator(from PlantTFDB)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
details

4.Expression profilings