CFinderM000754's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Ribosome0.005457885KEGG
outer membrane,0.014971734GO:0019867
proteasome core complex, alpha-subunit complex,0.015793128GO:0019773
structural constituent of ribosome,0.015986115GO:0003735
threonine-type endopeptidase activity,0.015986115GO:0004298
endopeptidase activity,0.015986115GO:0004175
translation,0.016028187GO:0006412
intracellular,0.023041067GO:0005622
proteasome core complex,0.023041067GO:0005839
Proteasome0.023796465KEGG
proteolysis involved in cellular protein catabolic process,0.023979172GO:0051603

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000206G1130Outer membrane OMP85 family proteinAT5G05520 (5.40E-60)
PH01000322G0740Ribosomal protein S7e family proteinAT1G48830 (1.60E-82)
PH01000564G0240-AT4G26450 (8.80E-16)
PH01000781G0890Protein of unknown function (DUF3411)AT5G12470 (8.00E-103)
PH01001943G026020S proteasome alpha subunit G1AT2G27020 (1.00E-123)
PH01002440G0130Ribosomal protein S8 family proteinAT5G59850 (2.90E-67)
PH01005910G0020-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000227Valine,_leucine_and_isoleucine_biosynthesis
COPII_vesicle_coating
intracellular,
translational elongation,
details
CFinderM000295translation,
AGC_RSK-2 (from iTAK)
CMGC_GSK (from iTAK)
Ribosome
intracellular,
protein phosphorylation,
details
CFinderM000439polygalacturonase activity,
nucleosome assembly,
details
CFinderM000558Whirly Transcription_Regulator(from PlantTFDB)
COPII_vesicle_coating
aminoacyl-tRNA hydrolase activity,
intracellular,
details
CFinderM001171COPII_vesicle_coating
details

4.Expression profilings