CFinderM000765's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
protein import into nucleus,0.009277479GO:0006606
nucleus,0.023861694GO:0005634
nucleobase-containing compound metabolic process,0.027223268GO:0006139
bZIP Transcription_Regulator(from PlantTFDB)0.03012873GFam
Spliceosome0.035474674KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000010G2530ubiquitin-conjugating enzyme 5AT1G63800 (8.20E-68)
PH01000133G1350importin alpha isoform 2AT4G16143 (0.00E+00)
PH01000145G0570Cleavage and polyadenylation specificity factor (CPSF) A subunit proteinAT3G55200 (0.00E+00)
PH01000211G0840mRNAadenosine methylaseAT4G10760 (4.00E-166)
PH01000973G0500KH domain-containing proteinAT2G25970 (3.20E-94)
PH01001998G0220Basic-leucine zipper (bZIP) transcription factor family proteinAT2G40950 (1.60E-38)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000341exosome_(RNase_complex)
COP9_signalosome
details
CFinderM000692CMGC_CLK (from iTAK)
ornithine_metabolic_process
histone deacetylation,
ornithine carbamoyltransferase activity,
carboxyl- or carbamoyltransferase activity,
histone deacetylase activity,
Arginine_and_proline_metabolism
cellular amino acid metabolic process,
details
CFinderM000693ornithine_metabolic_process
histone deacetylation,
protein import into nucleus,
ornithine carbamoyltransferase activity,
carboxyl- or carbamoyltransferase activity,
histone deacetylase activity,
Arginine_and_proline_metabolism
cellular amino acid metabolic process,
protein transporter activity,
amino acid binding,
details
CFinderM000761tRNA aminoacylation for protein translation,
details
CFinderM000934protein import into nucleus,
nucleobase-containing compound metabolic process,
bZIP Transcription_Regulator(from PlantTFDB)
RNA binding,
details
CFinderM000935tRNA aminoacylation for protein translation,
Spliceosome
details
CFinderM000947protein import into nucleus,
nucleobase-containing compound metabolic process,
Ribosome_biogenesis_in_eukaryotes
details
CFinderM001466nucleobase-containing compound metabolic process,
eukaryotic translation initiation factor 3 complex,
details

4.Expression profilings