CFinderM000829's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
RLK-Pelle_LRR-Xa (from iTAK)0.004498242GFam
alternative_oxidase_activity0.009075425GO:0009916
isopentenyl-diphosphate delta-isomerase activity,0.011340559GO:0004452
Terpenoid_backbone_biosynthesis0.012929717KEGG
CAMK_CAMKL-CHK1 (from iTAK)0.018652708GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000810G0700Alternative oxidase family proteinAT4G22260 (2.80E-98)
PH01000843G0230CBL-interacting protein kinase 12AT4G18700 (5.00E-134)
PH01001157G0040BAK1-interacting receptor-like kinase 1AT5G48380 (0.00E+00)
PH01001549G0090-AT3G09050 (2.20E-49)
PH01002277G0190isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2AT3G02780 (2.00E-113)
PH01002388G0260-AT2G17240 (1.60E-09)
PH01003606G0050-AT5G57345 (4.00E-19)
PH01004567G0060ENTH/VHS/GAT family proteinAT2G38410 (1.90E-27)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000016protein phosphorylation,
protein kinase activity,
transferase activity, transferring phosphorus-containing groups,
protein serine/threonine kinase activity,
ATP binding,
RLK-Pelle_LRR-XII-1 (from iTAK)
RLK-Pelle_DLSV (from iTAK)
RLK-Pelle_WAK (from iTAK)
ADP_binding
polysaccharide_binding
transmembrane_transporter_activity
WRKY Transcription_Regulator(from PlantTFDB)
recognition of pollen,
transmembrane transport,
defense response,
RLK-Pelle_L-LEC (from iTAK)
membrane,
integral to membrane,
RLK-Pelle_SD-2b (from iTAK)
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
ATPase activity,
substrate-specific transmembrane transporter activity,
RLK-Pelle_LRR-XI-1 (from iTAK)
6-phosphofructokinase complex,
details
CFinderM000024HB-BELL Transcription_Regulator(from iTAK)
TALE Transcription_Regulator(from PlantTFDB)
photosystem I,
chlorophyll binding,
DNA binding,
Photosynthesis
regulation of transcription, DNA-dependent,
RLK-Pelle_LRR-Xa (from iTAK)
sequence-specific DNA binding,
Photosynthesis
details
CFinderM000030RLK-Pelle_LRR-Xa (from iTAK)
CAMK_CAMKL-CHK1 (from iTAK)
details
CFinderM000034RLK-Pelle_LRR-Xa (from iTAK)
fructose_1,6-bisphosphate_1-phosphatase_activity
details
CFinderM000065RLK-Pelle_LRR-Xa (from iTAK)
fatty-acyl-CoA_reductase_(alcohol-forming)_activity
details
CFinderM000075regulation of transcription, DNA-dependent,
sequence-specific DNA binding transcription factor activity,
integral to membrane,
details
CFinderM000094RLK-Pelle_LRR-Xa (from iTAK)
Biosynthesis_of_unsaturated_fatty_acids
Fatty_acid_biosynthesis
fatty acid metabolic process,
details
CFinderM000113RLK-Pelle_LRR-Xa (from iTAK)
intrinsic to endoplasmic reticulum membrane,
ADP_binding
details
CFinderM000247RLK-Pelle_LRR-Xa (from iTAK)
protein binding,
translational elongation,
details
CFinderM000294RLK-Pelle_LRR-Xa (from iTAK)
photosystem I reaction center,
photosystem I,
ATP synthesis coupled proton transport,
Photosynthesis
hydrogen ion transporting ATP synthase activity, rotational mechanism,
details
CFinderM000318RLK-Pelle_LRR-Xa (from iTAK)
thylakoid membrane organization,
cell proliferation,
growth factor activity,
extracellular region,
photosystem II,
Photosynthesis
details
CFinderM000362RLK-Pelle_LRR-Xa (from iTAK)
leucyl-tRNA aminoacylation,
guanosine tetraphosphate metabolic process,
Aminoacyl-tRNA_biosynthesis
leucine-tRNA ligase activity,
rRNA processing,
ribosome binding,
aminoacyl-tRNA_editing_activity
tRNA aminoacylation for protein translation,
details
CFinderM000373RLK-Pelle_LRR-Xa (from iTAK)
SET Transcription_Regulator(from iTAK)
[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity,
transcription termination, DNA-dependent,
RNA_degradation
photosystem II,
extrinsic to membrane,
oxygen evolving complex,
chloroplast,
protein refolding,
details
CFinderM000392malate_transport
Peroxisome
Glyoxylate_and_dicarboxylate_metabolism
glycopeptide_alpha-N-acetylgalactosaminidase_activity
serine-type carboxypeptidase activity,
FMN binding,
details
CFinderM000419RLK-Pelle_LRR-Xa (from iTAK)
Ribosome
Ribosome
translation,
rRNA processing,
structural constituent of ribosome,
details
CFinderM000424carboxylic acid metabolic process,
carboxy-lyase activity,
cellular amino acid metabolic process,
RLK-Pelle_LRR-Xa (from iTAK)
pyridoxal phosphate binding,
Ascorbate_and_aldarate_metabolism
Glutathione_metabolism
details
CFinderM000464extrinsic to membrane,
oxygen evolving complex,
photosystem II,
Photosynthesis
RLK-Pelle_LRR-Xa (from iTAK)
calcium ion binding,
details
CFinderM000484RLK-Pelle_LRR-Xa (from iTAK)
sigma factor activity,
heat shock protein binding,
details
CFinderM000564RLK-Pelle_LRR-Xa (from iTAK)
sigma factor activity,
transcription initiation, DNA-dependent,
details
CFinderM000565Ubiquinone_and_other_terpenoid-quinone_biosynthesis
leucyl-tRNA aminoacylation,
RLK-Pelle_LRR-Xa (from iTAK)
GT2 GlycosylTransferases
Aminoacyl-tRNA_biosynthesis
SET Transcription_Regulator(from iTAK)
prenyltransferase activity,
leucine-tRNA ligase activity,
aminoacyl-tRNA_editing_activity
details
CFinderM000628RLK-Pelle_LRR-Xa (from iTAK)
C2H2 Transcription_Regulator(from PlantTFDB)
details
CFinderM000669RLK-Pelle_LRR-Xa (from iTAK)
copper_ion_transmembrane_transport
HB-BELL Transcription_Regulator(from iTAK)
TALE Transcription_Regulator(from PlantTFDB)
copper ion transmembrane transporter activity,
details
CFinderM000859RLK-Pelle_LRR-Xa (from iTAK)
transcription termination, DNA-dependent,
thylakoid membrane,
photosystem I,
CAMK_CDPK (from iTAK)
Photosynthesis
details
CFinderM000980MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
RLK-Pelle_LRR-Xa (from iTAK)
details
CFinderM000981alternative_oxidase_activity
Arachidonic_acid_metabolism
Metabolism_of_xenobiotics_by_cytochrome_P450
chloroplast,
structural molecule activity,
details
CFinderM001007RLK-Pelle_LRR-Xa (from iTAK)
Terpenoid_backbone_biosynthesis
isopentenyl-diphosphate delta-isomerase activity,
coproporphyrinogen oxidase activity,
porphyrin-containing compound biosynthetic process,
transferase activity, transferring phosphorus-containing groups,
isoprenoid biosynthetic process,
details
CFinderM001008RLK-Pelle_LRR-Xa (from iTAK)
porphobilinogen synthase activity,
coproporphyrinogen oxidase activity,
tetrapyrrole biosynthetic process,
porphyrin-containing compound biosynthetic process,
Porphyrin_and_chlorophyll_metabolism
details
CFinderM001137RLK-Pelle_LRR-Xa (from iTAK)
coproporphyrinogen oxidase activity,
porphyrin-containing compound biosynthetic process,
Porphyrin_and_chlorophyll_metabolism
Terpenoid_backbone_biosynthesis
isoprenoid biosynthetic process,
mRNA_surveillance_pathway
details
CFinderM001289RLK-Pelle_LRR-Xa (from iTAK)
alternative_oxidase_activity
Metabolism_of_xenobiotics_by_cytochrome_P450
Ascorbate_and_aldarate_metabolism
Retinol_metabolism
Porphyrin_and_chlorophyll_metabolism
Pentose_and_glucuronate_interconversions
Drug_metabolism_-_cytochrome_P450
Steroid_hormone_biosynthesis
Drug_metabolism_-_other_enzymes
details
CFinderM001346plasma membrane,
RLK-Pelle_LRR-Xa (from iTAK)
oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor,
ribonuclease III activity,
details
CFinderM001423Glycine,_serine_and_threonine_metabolism
intracellular,
Arachidonic_acid_metabolism
glutathione peroxidase activity,
details
CFinderM001507Alanine,_aspartate_and_glutamate_metabolism
purine nucleotide biosynthetic process,
RLK-Pelle_LRR-Xa (from iTAK)
adenylosuccinate synthase activity,
[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity,
AGC_RSK-2 (from iTAK)
SET Transcription_Regulator(from iTAK)
chloroplast,
Purine_metabolism
protein phosphorylation,
details
CFinderM001533RLK-Pelle_LRR-Xa (from iTAK)
cytochrome b6f complex,
Ubiquinone_and_other_terpenoid-quinone_biosynthesis
translation,
cation binding,
structural constituent of ribosome,
alpha-amylase activity,
large ribosomal subunit,
details

4.Expression profilings