|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, | 0.016484276 | GO:0016810 | | cellular protein modification process, | 0.030385059 | GO:0006464 | | nitrogen compound metabolic process, | 0.030385059 | GO:0006807 | | response to stress, | 0.04090479 | GO:0006950 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000006G0430 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein | AT4G08790 (3.00E-106) | | PH01000122G1500 | aromatic and neutral transporter 1 | AT3G11900 (3.00E-114) | | PH01000266G0360 | calmodulin (CAM)-binding protein of 25 kDa | AT2G41010 (1.30E-08) | | PH01000339G0020 | - | - (-) | | PH01003434G0100 | Ubiquitin-conjugating enzyme/RWD-like protein | AT2G38830 (1.60E-24) | | PH01005823G0030 | ARM repeat superfamily protein | AT1G08315 (3.30E-56) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000020 | nitrogen compound metabolic process,
GT8 GlycosylTransferases
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
Plant_hormone_signal_transduction
| details | | CFinderM000091 | Fatty_acid_elongation
membrane,
| details | | CFinderM000124 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
nitrogen compound metabolic process,
| details | | CFinderM000224 | Others Transcription_Regulator(from iTAK)
mediator complex,
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
RNA_polymerase_II_transcription_cofactor_activity
regulation of transcription from RNA polymerase II promoter,
nitrogen compound metabolic process,
Drug_metabolism_-_other_enzymes
Steroid_hormone_biosynthesis
Retinol_metabolism
Drug_metabolism_-_cytochrome_P450
Porphyrin_and_chlorophyll_metabolism
Metabolism_of_xenobiotics_by_cytochrome_P450
Pentose_and_glucuronate_interconversions
Ascorbate_and_aldarate_metabolism
| details | | CFinderM000258 | cellular protein modification process,
protein neddylation,
phosphopyruvate hydratase complex,
NF-YB Transcription_Regulator(from PlantTFDB)
PLATZ Transcription_Regulator(from iTAK)
RLK-Pelle_LRR-VI-2 (from iTAK)
| details | | CFinderM000285 | ABC_transporters
| details | | CFinderM000400 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
nitrogen compound metabolic process,
| details | | CFinderM000514 | cell redox homeostasis,
protein disulfide oxidoreductase activity,
nitrogen compound metabolic process,
electron carrier activity,
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
| details | | CFinderM000516 | oligopeptide transport,
nitrogen compound metabolic process,
| details | | CFinderM000600 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
trehalose biosynthetic process,
nitrogen compound metabolic process,
| details | | CFinderM000699 | GH18 Glycoside_Hydrolases
Amino_sugar_and_nucleotide_sugar_metabolism
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
nitrogen compound metabolic process,
cellular protein modification process,
| details | | CFinderM000714 | nitrogen compound metabolic process,
| details | | CFinderM000857 | RLK-Pelle_WAK_LRK10L-1 (from iTAK)
ATP biosynthetic process,
ATP_catabolic_process
nitrogen compound metabolic process,
Oxidative_phosphorylation
| details | | CFinderM000858 | RLK-Pelle_WAK_LRK10L-1 (from iTAK)
nitrogen compound metabolic process,
| details | | CFinderM000896 | Fatty_acid_elongation
fatty acid biosynthetic process,
transferase activity, transferring acyl groups other than amino-acyl groups,
membrane,
metabolic process,
catalytic activity,
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
lipid binding,
lipid transport,
nitrogen compound metabolic process,
lipid biosynthetic process,
transferase activity, transferring acyl groups,
| details | | CFinderM001071 | GH18 Glycoside_Hydrolases
Amino_sugar_and_nucleotide_sugar_metabolism
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
nitrogen compound metabolic process,
cellular protein modification process,
| details | | CFinderM001260 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
nitrogen compound metabolic process,
| details | | CFinderM001342 | | details | | CFinderM001349 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
nitrogen compound metabolic process,
cation-transporting_ATPase_activity
cation transport,
| details | | CFinderM001412 | protein neddylation,
PLATZ Transcription_Regulator(from iTAK)
RLK-Pelle_LRR-VI-2 (from iTAK)
cellular protein modification process,
Ubiquitin_mediated_proteolysis
RNA_degradation
small protein activating enzyme activity,
| details | | CFinderM001538 | oligopeptide transport,
transporter activity,
| details | | CFinderM001539 | protein methylation,
| details | | CFinderM001677 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
nitrogen compound metabolic process,
| details |
4.Expression profilings |
