CFinderM000900's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
phosphopyruvate hydratase complex,9.02E-06GO:0000015
glycolysis,1.58E-05GO:0006096
phosphopyruvate hydratase activity,0.000111919GO:0004634
Alanine,_aspartate_and_glutamate_metabolism0.002750129KEGG
TKL-Pl-6 (from iTAK)0.003495572GFam
magnesium ion binding,0.006206712GO:0000287
argininosuccinate synthase activity,0.006206712GO:0004055
6-phosphofructokinase complex,0.009724894GO:0005945
arginine biosynthetic process,0.014691043GO:0006526

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000061G1230Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domainAT3G46920 (3.00E-118)
PH01000062G1100Phosphofructokinase family proteinAT1G76550 (0.00E+00)
PH01000417G0610FAD/NAD(P)-binding oxidoreductase family proteinAT5G49555 (0.00E+00)
PH01001196G0170EnolaseAT2G36530 (9.60E-96)
PH01001196G0200EnolaseAT2G36530 (4.50E-84)
PH01001307G0060-AT2G14910 (2.00E-46)
PH01006110G0040arginosuccinate synthase familyAT4G24830 (0.00E+00)
PH01007143G0030PDI-like 5-2AT1G35620 (1.00E-126)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000694IWS1 Transcription_Regulator(from iTAK)
details
CFinderM0009626-phosphofructokinase complex,
6-phosphofructokinase activity,
glycolysis,
translation_initiation_factor_binding
diphosphate-fructose-6-phosphate 1-phosphotransferase activity,
eukaryotic translation initiation factor 3 complex,
fructose_6-phosphate_metabolic_process
translational initiation,
ATP synthesis coupled proton transport,
hydrogen ion transporting ATP synthase activity, rotational mechanism,
Oxidative_phosphorylation
RNA_transport
details
CFinderM001004IWS1 Transcription_Regulator(from iTAK)
heme_a_biosynthetic_process
threonyl-tRNA aminoacylation,
tRNA aminoacylation,
threonine-tRNA ligase activity,
Aminoacyl-tRNA_biosynthesis
Porphyrin_and_chlorophyll_metabolism
ligase activity, forming aminoacyl-tRNA and related compounds,
oxidoreductase activity, acting on the CH-CH group of donors,
Oxidative_phosphorylation
nucleotide binding,
tRNA aminoacylation for protein translation,
details
CFinderM001312metalloendopeptidase activity,
Riboflavin_metabolism
6-phosphofructokinase complex,
GTP cyclohydrolase II activity,
catalytic activity,
3,4-dihydroxy-2-butanone-4-phosphate synthase activity,
proteolysis,
riboflavin biosynthetic process,
metallopeptidase activity,
6-phosphofructokinase activity,
glycolysis,
details
CFinderM001397GT4 GlycosylTransferases
details
CFinderM001494GRAS Transcription_Regulator(from PlantTFDB)
protein catabolic process,
details
CFinderM001535TAZ Transcription_Regulator(from iTAK)
transcription cofactor activity,
histone acetyltransferase activity,
Oxidative_phosphorylation
peptidyl-prolyl cis-trans isomerase activity,
details
CFinderM001561GT48 GlycosylTransferases
HB-KNOX Transcription_Regulator(from iTAK)
TKL-Pl-6 (from iTAK)
TALE Transcription_Regulator(from PlantTFDB)
1,3-beta-D-glucan synthase complex,
details
CFinderM001569Alanine,_aspartate_and_glutamate_metabolism
TAZ Transcription_Regulator(from iTAK)
Group-Pl-3 (from iTAK)
CMGC_CLK (from iTAK)
NF-YC Transcription_Regulator(from PlantTFDB)
HB-other Transcription_Regulator(from PlantTFDB)
arginine biosynthetic process,
'de novo' IMP biosynthetic process,
eukaryotic translation elongation factor 1 complex,
argininosuccinate synthase activity,
phosphoribosylformylglycinamidine cyclo-ligase activity,
details

4.Expression profilings