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1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | mRNA_catabolic_process | 7.05E-10 | GO:0006402 | | polyribonucleotide_nucleotidyltransferase_activity | 1.07E-09 | GO:0004654 | | RNA binding, | 1.43E-06 | GO:0003723 | | 3'-5'-exoribonuclease activity, | 0.001562598 | GO:0000175 | | CE8 Carbohydrate_Esterases | 0.003371257 | GFam | | cell wall, | 0.010271326 | GO:0005618 | | cell wall modification, | 0.013896658 | GO:0042545 | | pectinesterase activity, | 0.018297506 | GO:0030599 | | RNA processing, | 0.02325804 | GO:0006396 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000011G0270 | pale cress protein (PAC) | AT2G48120 (3.10E-82) | | PH01000103G1610 | pectin methylesterase 31 | AT3G29090 (2.00E-139) | | PH01002314G0120 | polyribonucleotide nucleotidyltransferase, putative | AT3G03710 (3.00E-115) | | PH01002314G0160 | polyribonucleotide nucleotidyltransferase, putative | AT3G03710 (1.40E-48) | | PH01002405G0160 | DOMAIN OF UNKNOWN FUNCTION 724 5 | AT2G47220 (4.00E-19) | | PH01003539G0020 | CRS1 / YhbY (CRM) domain-containing protein | AT4G29750 (2.00E-169) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000626 | mRNA_catabolic_process
polyribonucleotide_nucleotidyltransferase_activity
CMGC_MAPK (from iTAK)
3'-5'-exoribonuclease activity,
RNA binding,
RNA processing,
Purine_metabolism
RNA_degradation
Pyrimidine_metabolism
| details | | CFinderM001306 | mRNA_catabolic_process
polyribonucleotide_nucleotidyltransferase_activity
CE8 Carbohydrate_Esterases
RNA binding,
conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA
methionyl-tRNA formyltransferase activity,
3'-5'-exoribonuclease activity,
hydroxymethyl-, formyl- and related transferase activity,
| details |
4.Expression profilings |
