|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | LIM Transcription_Regulator(from iTAK) | 0.005059969 | GFam | | RLK-Pelle_LRR-V (from iTAK) | 0.006317849 | GFam | | Amino_sugar_and_nucleotide_sugar_metabolism | 0.028331435 | KEGG | | cellular carbohydrate metabolic process, | 0.044436718 | GO:0044262 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000006G1570 | GATA type zinc finger transcription factor family protein | AT1G10200 (9.30E-88) | | PH01000045G0040 | LMBR1-like membrane protein | AT3G08930 (3.00E-109) | | PH01000068G0630 | novel plant snare 13 | AT3G17440 (8.40E-78) | | PH01000114G1020 | FAD/NAD(P)-binding oxidoreductase family protein | AT5G22140 (1.00E-120) | | PH01000724G0740 | Transducin/WD40 repeat-like superfamily protein | AT4G38480 (3.00E-108) | | PH01000799G0330 | STRUBBELIG-receptor family 6 | AT1G53730 (0.00E+00) | | PH01003016G0230 | Ubiquitin-specific protease family C19-related protein | AT1G16860 (8.00E-95) | | PH01004449G0070 | N-acetylglucosamine-1-phosphate uridylyltransferase 1 | AT1G31070 (0.00E+00) | | PH01004709G0070 | ATP-citrate lyase B-1 | AT3G06650 (1.00E-164) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000338 | LIM Transcription_Regulator(from iTAK)
nucleic acid binding,
nucleotide binding,
zinc ion binding,
| details | | CFinderM000546 | GTnc GlycosylTransferases
cellular carbohydrate metabolic process,
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer,
cofactor binding,
acetylglucosaminyltransferase activity,
endoplasmic reticulum,
| details | | CFinderM000930 | LIM Transcription_Regulator(from iTAK)
RLK-Pelle_LRR-V (from iTAK)
| details | | CFinderM001027 | RLK-Pelle_SD-2b (from iTAK)
Phenylalanine_metabolism
Phenylpropanoid_biosynthesis
Methane_metabolism
| details | | CFinderM001042 | CK1_CK1 (from iTAK)
protein transport,
Citrate_cycle_(TCA_cycle)
Carbon_fixation_pathways_in_prokaryotes
Endocytosis
| details | | CFinderM001697 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
L-phenylalanine biosynthetic process,
cellular carbohydrate metabolic process,
peptide-methionine-(S)-S-oxide reductase activity,
prephenate dehydratase activity,
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer,
Carbon_fixation_pathways_in_prokaryotes
cofactor binding,
Citrate_cycle_(TCA_cycle)
| details |
4.Expression profilings |
