|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | microtubule-based movement, | 0.000373328 | GO:0007018 | | microtubule associated complex, | 0.000414607 | GO:0005875 | | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis | 0.001125158 | KEGG | | microtubule motor activity, | 0.002590428 | GO:0003777 | | aromatic amino acid family biosynthetic process, | 0.004215059 | GO:0009073 | | 3-dehydroquinate synthase activity, | 0.008153444 | GO:0003856 | | minus-end-directed_microtubule_motor_activity | 0.013582703 | GO:0008569 | | RNA_degradation | 0.030405325 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000183G0310 | Di-glucose binding protein with Kinesin motor domain | AT1G72250 (0.00E+00) | | PH01002600G0080 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | AT1G59540 (3.00E-164) | | PH01003872G0040 | non-intrinsic ABC protein 9 | AT5G02270 (2.00E-117) | | PH01004212G0070 | forkhead-associated (FHA) domain-containing protein | AT1G34355 (9.30E-47) | | PH01005629G0090 | forkhead-associated (FHA) domain-containing protein | AT1G34355 (1.40E-27) | | PH01006031G0060 | 3-dehydroquinate synthase, putative | AT5G66120 (1.00E-170) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000363 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
aromatic amino acid family biosynthetic process,
3-dehydroquinate synthase activity,
ribonucleoside_binding
transcription, DNA-dependent,
DNA-directed RNA polymerase activity,
| details | | CFinderM000527 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
3-dehydroquinate synthase activity,
regulation_of_cell_cycle
aromatic amino acid family biosynthetic process,
regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity
protein_kinase_binding
| details | | CFinderM000638 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
aromatic amino acid family biosynthetic process,
3-dehydroquinate synthase activity,
B3 Transcription_Regulator(from PlantTFDB)
SNF2 Transcription_Regulator(from iTAK)
Others Transcription_Regulator(from iTAK)
| details | | CFinderM000788 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
3-dehydroquinate synthase activity,
B3-ARF Transcription_Regulator(from iTAK)
ARF Transcription_Regulator(from PlantTFDB)
cytoplasm,
protein complex,
aromatic amino acid family biosynthetic process,
response to hormone stimulus,
protein polymerization,
Plant_hormone_signal_transduction
| details | | CFinderM000998 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
Lysine_degradation
HB-other Transcription_Regulator(from PlantTFDB)
histone_methylation
histone_lysine_methylation
aromatic amino acid family biosynthetic process,
SET Transcription_Regulator(from iTAK)
| details | | CFinderM001002 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
aromatic amino acid family biosynthetic process,
cytokinesis
microtubule cytoskeleton organization,
3-dehydroquinate synthase activity,
| details | | CFinderM001059 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
3-dehydroquinate synthase activity,
SNARE_interactions_in_vesicular_transport
Golgi vesicle transport,
aromatic amino acid family biosynthetic process,
phosphatidylinositol metabolic process,
RNA_degradation
| details | | CFinderM001179 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
aromatic amino acid family biosynthetic process,
| details | | CFinderM001399 | RNA_transport
Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
3-dehydroquinate synthase activity,
Base_excision_repair
| details | | CFinderM001400 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
3-dehydroquinate synthase activity,
ribonuclease H activity,
DNA photolyase activity,
cytokinesis
aromatic amino acid family biosynthetic process,
microtubule cytoskeleton organization,
RNA metabolic process,
DNA_replication
microtubule binding,
ubiquitin ligase complex,
Ubiquitin_mediated_proteolysis
protein ubiquitination,
DNA repair,
| details | | CFinderM001756 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
Lipoic_acid_metabolism
HB-BELL Transcription_Regulator(from iTAK)
TALE Transcription_Regulator(from PlantTFDB)
aromatic amino acid family biosynthetic process,
lipoate biosynthetic process,
lipoate synthase activity,
3-dehydroquinate synthase activity,
| details |
4.Expression profilings |
