CFinderM000960's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Ubiquitin_mediated_proteolysis0.000809998KEGG
anaphase-promoting complex,0.009277479GO:0005680
cullin-RING ubiquitin ligase complex,0.013896658GO:0031461

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000303G0070cullin 3AT1G26830 (0)
PH01000460G0120auxin transport protein (BIG)AT3G02260 (0.00E+00)
PH01000511G0430-- (-)
PH01000982G0620chromatin remodeling 4AT5G44800 (1.60E-68)
PH01001239G0380homolog of histone chaperone HIRAAT3G44530 (0.00E+00)
PH01001382G0410anaphase-promoting complex/cyclosome 11AT3G05870 (1.30E-30)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000911intracellular,
Ribosome
translation,
PHD Transcription_Regulator(from iTAK)
structural constituent of ribosome,
protein import into nucleus,
details
CFinderM000912intracellular,
SWI/SNF-SWI3 Transcription_Regulator(from iTAK)
Ribosome
translation,
cellular protein modification process,
structural constituent of ribosome,
Ubiquitin_mediated_proteolysis
details
CFinderM000913Ribosome
translation,
Ribosome
intracellular,
cullin-RING ubiquitin ligase complex,
structural constituent of ribosome,
ubiquitin protein ligase binding,
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
ubiquitin-dependent protein catabolic process,
Ubiquitin_mediated_proteolysis
details
CFinderM000973STE_STE11 (from iTAK)
protein import into nucleus,
RNA_degradation
phospholipid transport,
details

4.Expression profilings