|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | intracellular, | 0.001236168 | GO:0005622 | | putrescine biosynthetic process, | 0.006249902 | GO:0009446 | | translation, | 0.008743302 | GO:0006412 | | large ribosomal subunit, | 0.016976844 | GO:0015934 | | protein-arginine_deiminase_activity | 0.019083303 | GO:0004668 | | structural constituent of ribosome, | 0.019083303 | GO:0003735 | | 3'-5' exonuclease activity, | 0.019083303 | GO:0008408 | | nucleobase-containing compound metabolic process, | 0.02749825 | GO:0006139 | | cellular metabolic process, | 0.042613718 | GO:0044237 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000035G1530 | porphyromonas-type peptidyl-arginine deiminase family protein | AT5G08170 (4.00E-103) | | PH01000299G0470 | Ribosomal protein L1p/L10e family | AT1G08360 (1.20E-95) | | PH01000529G0560 | fimbrin-like protein 2 | AT5G35700 (0.00E+00) | | PH01000868G0500 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain | AT5G35910 (1.30E-60) | | PH01002412G0120 | Zinc-binding ribosomal protein family protein | AT4G14320 (5.50E-45) | | PH01028510G0010 | - | - (-) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000745 | GMP synthase (glutamine-hydrolyzing) activity,
pyrophosphatase_activity
CMGC_GSK (from iTAK)
protein-arginine_deiminase_activity
| details | | CFinderM000746 | CMGC_DYRK-YAK (from iTAK)
TKL-Pl-6 (from iTAK)
| details | | CFinderM001305 | SNF2 Transcription_Regulator(from iTAK)
5'-3' exoribonuclease activity,
nucleic acid binding,
intracellular,
large ribosomal subunit,
nucleobase-containing compound metabolic process,
exonuclease activity,
| details | | CFinderM001668 | poly(A)+ mRNA export from nucleus,
SET Transcription_Regulator(from iTAK)
histone_lysine_methylation
large ribosomal subunit,
nuclear pore,
| details |
4.Expression profilings |
