CFinderM001055's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
NF-YB Transcription_Regulator(from PlantTFDB)0.006083476GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000055G1160-AT4G39690 (1.10E-97)
PH01000071G1120protein serine/threonine kinases;ATP binding;catalyticsAT3G51270 (6.00E-137)
PH01000251G0570copper ion transmembrane transportersAT2G37920 (4.50E-45)
PH01000395G0550-- (-)
PH01000395G0560ARM repeat superfamily proteinAT4G27640 (0.00E+00)
PH01000589G0690succinate dehydrogenase 1-1AT5G66760 (0.00E+00)
PH01000608G0480Eukaryotic protein of unknown function (DUF872)AT2G19350 (1.60E-15)
PH01001599G0380-- (-)
PH01001725G0350protein phosphatase 5.2AT2G42810 (6.00E-170)
PH01001912G0320MD-2-related lipid recognition domain-containing protein / ML domain-containing proteinAT3G11780 (7.00E-44)
PH01001962G0210tetratricopeptide repeat (TPR)-containing proteinAT1G80410 (0.00E+00)
PH01004500G0050nuclear factor Y, subunit B13AT5G23090 (1.20E-58)
PH01005293G0030polypyrimidine tract-binding protein 1AT3G01150 (3.00E-157)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000611WNK_NRBP (from iTAK)
PHD Transcription_Regulator(from iTAK)
details
CFinderM000697Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
details
CFinderM000862DBP Transcription_Regulator(from iTAK)
Golgi stack,
GPI-anchor transamidase complex,
details
CFinderM001054seryl-tRNA aminoacylation,
electron transport chain,
bZIP Transcription_Regulator(from PlantTFDB)
serine-tRNA ligase activity,
RNA metabolic process,
details
CFinderM001310mRNA_surveillance_pathway
binding,
details
CFinderM001342details
CFinderM001449WNK_NRBP (from iTAK)
CAMK_CAMKL-CHK1 (from iTAK)
details
CFinderM001508mitochondrial outer membrane,
isocitrate metabolic process,
isocitrate dehydrogenase (NADP+) activity,
NAD binding,
details
CFinderM001509Fatty_acid_metabolism
alpha-Linolenic_acid_metabolism
Ribosome
nuclear pore,
fatty acid metabolic process,
translation,
DNA integration,
3-hydroxyacyl-CoA_dehydrogenase_activity
details
CFinderM001532GT1 GlycosylTransferases
sucrose-phosphate synthase activity,
lipid glycosylation,
positive_regulation_of_transcription,_DNA-templated
cis-Golgi network,
thylakoid,
transcription initiation from RNA polymerase II promoter,
fructose_6-phosphate_metabolic_process
photosystem I,
6-phosphofructokinase complex,
sucrose metabolic process,
details
CFinderM001534DNA integration,
translation,
nuclear pore,
large ribosomal subunit,
glycerol ether metabolic process,
details
CFinderM001654WNK_NRBP (from iTAK)
RNA_transport
details
CFinderM001743details
CFinderM001760Citrate_cycle_(TCA_cycle)
oxoglutarate dehydrogenase complex,
transferase activity, transferring acyl groups,
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity,
dihydrolipoyllysine-residue succinyltransferase activity,
tricarboxylic acid cycle,
electron transport chain,
cellular protein modification process,
Lysine_degradation
details
CFinderM001821protein processing,
mRNA_surveillance_pathway
protein binding,
details
CFinderM001822protein processing,
PHD Transcription_Regulator(from iTAK)
details
CFinderM001847peptide-methionine_(R)-S-oxide_reductase_activity
binding,
metallopeptidase activity,
details
CFinderM001857protein processing,
antioxidant activity,
peroxiredoxin activity,
details

4.Expression profilings


Show details about module gene expression profiling