|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | response to hormone stimulus, | 0.000464022 | GO:0009725 | | RLK-Pelle_URK-1 (from iTAK) | 0.001124807 | GFam | | galactose metabolic process, | 0.02340397 | GO:0006012 | | nucleus, | 0.023861694 | GO:0005634 | | UDP-glucose 4-epimerase activity, | 0.033390561 | GO:0003978 | | protein dimerization activity, | 0.033390561 | GO:0046983 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000001G0800 | SH3 domain-containing protein | AT4G34660 (2.00E-130) | | PH01000087G1340 | auxin response factor 8 | AT5G37020 (0.00E+00) | | PH01000300G0530 | NAD(P)-binding Rossmann-fold superfamily protein | AT1G30620 (8.00E-164) | | PH01000845G0200 | Protein kinase superfamily protein | AT1G49730 (9.00E-102) | | PH01001022G0480 | mechanosensitive channel of small conductance-like 10 | AT5G12080 (1.00E-115) | | PH01001899G0250 | auxin response factor 8 | AT5G37020 (0) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM001058 | RLK-Pelle_URK-1 (from iTAK)
NEK (from iTAK)
| details | | CFinderM001059 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
3-dehydroquinate synthase activity,
SNARE_interactions_in_vesicular_transport
Golgi vesicle transport,
aromatic amino acid family biosynthetic process,
phosphatidylinositol metabolic process,
RNA_degradation
| details | | CFinderM001166 | DNA_replication
Nucleotide_excision_repair
Mismatch_repair
Riboflavin_metabolism
histone acetylation,
chromatin modification,
chromatin silencing at telomere,
| details | | CFinderM001854 | HSF Transcription_Regulator(from PlantTFDB)
fatty-acyl-CoA binding,
| details |
4.Expression profilings |
