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1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | Pantothenate_and_CoA_biosynthesis | 0.006328304 | KEGG | | tRNA processing, | 0.017678922 | GO:0008033 | | methyltransferase activity, | 0.035974216 | GO:0008168 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000014G1340 | FRIGIDA interacting protein 1 | AT2G06005 (1.60E-83) | | PH01000303G0540 | 4-phospho-panto-thenoylcysteine synthetase | AT1G12350 (1.60E-51) | | PH01000474G0310 | - | AT1G03250 (6.00E-70) | | PH01000985G0600 | methyltransferases | AT4G01880 (2.40E-90) | | PH01001316G0110 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT2G30780 (7.10E-82) | | PH01003011G0140 | SNF7 family protein | AT2G06530 (3.40E-57) | | PH01006670G0010 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | AT1G33970 (1.00E-18) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000347 | Pantothenate_and_CoA_biosynthesis
Valine,_leucine_and_isoleucine_degradation
CMGC_CDK-CRK7-CDK9 (from iTAK)
pantothenate kinase activity,
coenzyme A biosynthetic process,
Propanoate_metabolism
beta-Alanine_metabolism
| details | | CFinderM000717 | tRNA processing,
| details | | CFinderM001019 | protein transport,
| details | | CFinderM001085 | | details | | CFinderM001105 | Endocytosis
pseudouridine synthesis,
RNA modification,
regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity
protein_kinase_binding
pseudouridine synthase activity,
| details | | CFinderM001106 | Endocytosis
| details | | CFinderM001761 | large ribosomal subunit,
intracellular,
| details |
4.Expression profilings |
