CFinderM001088's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
CBM20 Carbohydrate-Binding_Modules0.002406024GFam
GH77 Glycoside_Hydrolases0.002406024GFam
katanin_complex0.004592027GO:0008352
microtubule_severing0.008418716GO:0051013
SNF2 Transcription_Regulator(from iTAK)0.019566478GFam
Starch_and_sucrose_metabolism0.031725274KEGG
4-alpha-glucanotransferase activity,0.036170628GO:0004134
starch_binding0.045187855GO:2001070

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000063G0330DHHC-type zinc finger family proteinAT3G26935 (2.00E-115)
PH01000229G1390AMP-dependent synthetase and ligase family proteinAT5G63380 (7.00E-148)
PH01000267G1380Transducin/WD40 repeat-like superfamily proteinAT5G23430 (1.00E-149)
PH01000643G0410SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing proteinAT5G07810 (0.00E+00)
PH01000936G0470disproportionating enzyme 2AT2G40840 (0.00E+00)
PH01002741G0240DHHC-type zinc finger family proteinAT3G60800 (1.00E-118)
PH01003018G0190SIGNAL PEPTIDE PEPTIDASE-LIKE 1AT4G33410 (2.00E-161)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000253GT47 GlycosylTransferases
sialyltransferase activity,
Mismatch_repair
mismatched DNA binding,
protein glycosylation,
DNA_replication
details
CFinderM000351katanin_complex
SAGA-type_complex
details
CFinderM001092CBM20 Carbohydrate-Binding_Modules
GH77 Glycoside_Hydrolases
membrane coat,
4-alpha-glucanotransferase activity,
starch_binding
details
CFinderM001188spermine biosynthetic process,
spermidine biosynthetic process,
adenosylmethionine decarboxylase activity,
Cysteine_and_methionine_metabolism
Arginine_and_proline_metabolism
details
CFinderM001437RLK-Pelle_C-LEC (from iTAK)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
protein phosphorylation,
details
CFinderM001450tRNA processing,
details

4.Expression profilings