CFinderM001118's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Aminoacyl-tRNA_biosynthesis0.011014889KEGG
threonyl-tRNA aminoacylation,0.016534656GO:0006435
HSF Transcription_Regulator(from PlantTFDB)0.02494497GFam
threonine-tRNA ligase activity,0.028638378GO:0004829
tRNA aminoacylation,0.034396095GO:0043039
C2H2 Transcription_Regulator(from PlantTFDB)0.039539236GFam
ligase activity, forming aminoacyl-tRNA and related compounds,0.040536177GO:0016876
tRNA aminoacylation for protein translation,0.047303717GO:0006418
cellular protein metabolic process,0.047303717GO:0044267

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000021G0290C2H2-type zinc finger family proteinAT5G04390 (1.50E-35)
PH01000384G0460T-complex protein 11AT1G22930 (0.00E+00)
PH01000668G0830T-complex protein 1 alpha subunitAT3G20050 (0.00E+00)
PH01000673G0190metaxin-relatedAT2G19080 (1.10E-51)
PH01001248G0150Threonyl-tRNA synthetaseAT5G26830 (0.00E+00)
PH01001554G0310heat shock factor 4AT4G36990 (2.40E-27)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000433Ribosome_biogenesis_in_eukaryotes
ATP-dependent helicase activity,
threonine-tRNA ligase activity,
helicase activity,
details
CFinderM000538GT61 GlycosylTransferases
RLK-Pelle_PERK-1 (from iTAK)
GT47 GlycosylTransferases
Aminoacyl-tRNA_biosynthesis
threonyl-tRNA aminoacylation,
response to oxidative stress,
histidine_catabolic_process_to_glutamate_and_formamide
details
CFinderM000797threonyl-tRNA aminoacylation,
tRNA aminoacylation,
microtubule cytoskeleton organization,
cytokinesis
Aminoacyl-tRNA_biosynthesis
Ribosome_biogenesis_in_eukaryotes
threonine-tRNA ligase activity,
cellular amino acid metabolic process,
tRNA aminoacylation for protein translation,
ligase activity, forming aminoacyl-tRNA and related compounds,
microtubule binding,
details
CFinderM000906HSF Transcription_Regulator(from PlantTFDB)
protein ADP-ribosylation,
dephosphorylation,
protein methylation,
Base_excision_repair
details
CFinderM001004IWS1 Transcription_Regulator(from iTAK)
heme_a_biosynthetic_process
threonyl-tRNA aminoacylation,
tRNA aminoacylation,
threonine-tRNA ligase activity,
Aminoacyl-tRNA_biosynthesis
Porphyrin_and_chlorophyll_metabolism
ligase activity, forming aminoacyl-tRNA and related compounds,
oxidoreductase activity, acting on the CH-CH group of donors,
Oxidative_phosphorylation
nucleotide binding,
tRNA aminoacylation for protein translation,
details
CFinderM001044details
CFinderM001464MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
RNA processing,
details
CFinderM001744Ribosome_biogenesis_in_eukaryotes
Aminoacyl-tRNA_biosynthesis
threonyl-tRNA aminoacylation,
threonine-tRNA ligase activity,
tRNA aminoacylation,
tRNA aminoacylation for protein translation,
cellular protein metabolic process,
RNA processing,
ligase activity, forming aminoacyl-tRNA and related compounds,
details

4.Expression profilings