CFinderM001121's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
HB-other Transcription_Regulator(from PlantTFDB)8.63E-05GFam
transcription_regulatory_region_sequence-specific_DNA_binding0.000126416GO:0000976
HD-ZIP Transcription_Regulator(from PlantTFDB)0.000234345GFam
regulation of transcription, DNA-dependent,0.000327375GO:0006355
NAC Transcription_Regulator(from PlantTFDB)0.000675101GFam
DNA binding,0.000837442GO:0003677
sequence-specific DNA binding,0.017572904GO:0043565
sequence-specific DNA binding transcription factor activity,0.022867066GO:0003700
Rab GTPase activator activity,0.022867066GO:0005097
Glyoxylate_and_dicarboxylate_metabolism0.024943211KEGG
Citrate_cycle_(TCA_cycle)0.024943211KEGG
Lysine_biosynthesis0.024943211KEGG
Carbon_fixation_pathways_in_prokaryotes0.024943211KEGG
regulation of Rab GTPase activity,0.028181127GO:0032313
nucleus,0.032880228GO:0005634

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000065G0260-AT3G12760 (7.00E-101)
PH01000077G1100NAC domain containing protein 47AT3G04070 (3.70E-69)
PH01000718G0100homeobox protein 40AT4G36740 (2.20E-33)
PH01000718G0250homeobox protein 40AT4G36740 (1.20E-31)
PH01001292G0350NAC-like, activated by AP3/PIAT1G69490 (1.50E-69)
PH01001939G0270aconitase 3AT2G05710 (0.00E+00)
PH01002594G0130Mitochondrial substrate carrier family proteinAT4G26180 (1.00E-102)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000128integral_component_of_peroxisomal_membrane
autophagy,
peroxisome_fission
oligopeptide transport,
NAC Transcription_Regulator(from PlantTFDB)
RLK-Pelle_LRR-XI-1 (from iTAK)
details
CFinderM000477Valine,_leucine_and_isoleucine_degradation
ZF-HD Transcription_Regulator(from PlantTFDB)
Cyanoamino_acid_metabolism
oxidoreductase activity, acting on the CH-CH group of donors,
acyl-CoA dehydrogenase activity,
Rab GTPase activator activity,
Phenylpropanoid_biosynthesis
regulation of Rab GTPase activity,
details
CFinderM000644NAC Transcription_Regulator(from PlantTFDB)
regulation of transcription, DNA-dependent,
Trihelix Transcription_Regulator(from PlantTFDB)
details
CFinderM000722integral_component_of_peroxisomal_membrane
GH47 Glycoside_Hydrolases
autophagy,
peroxisome_fission
calcium ion binding,
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity,
ribonuclease III activity,
Protein_processing_in_endoplasmic_reticulum
details
CFinderM000884Protein_processing_in_endoplasmic_reticulum
GT48 GlycosylTransferases
HB-other Transcription_Regulator(from PlantTFDB)
HD-ZIP Transcription_Regulator(from PlantTFDB)
Nucleotide_excision_repair
proteasomal ubiquitin-dependent protein catabolic process,
outer membrane-bounded periplasmic space,
1,3-beta-D-glucan synthase complex,
(1->3)-beta-D-glucan biosynthetic process,
nucleotide-excision repair,
details

4.Expression profilings