CFinderM001126's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
negative_regulation_of_transcription,_DNA-templated0.023337771GO:0045892
RNA_degradation0.026934402KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000019G2350Tetratricopeptide repeat (TPR)-like superfamily proteinAT2G17670 (1.40E-39)
PH01000300G0290transcription regulator NOT2/NOT3/NOT5 family proteinAT5G18230 (0.00E+00)
PH01000450G0080plasma membrane intrinsic protein 2;8AT2G16850 (2.00E-132)
PH01000678G0660Protein of unknown function, DUF538AT1G55265 (4.90E-29)
PH01001203G0260Quinone reductase family proteinAT4G36750 (2.60E-80)
PH01001858G0220Bax inhibitor-1 family proteinAT3G63310 (3.70E-93)
PH01002550G0270SOUL heme-binding family proteinAT1G17100 (1.30E-36)
PH01002804G0160Protein of unknown function, DUF538AT1G61667 (3.50E-38)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000038bHLH Transcription_Regulator(from PlantTFDB)
details
CFinderM001035GT14 GlycosylTransferases
CAMTA Transcription_Regulator(from PlantTFDB)
microtubule,
protein complex,
RNA_degradation
Phagosome
details
CFinderM001381CAMTA Transcription_Regulator(from PlantTFDB)
details
CFinderM001425chromosome organization,
negative_regulation_of_transcription,_DNA-templated
chromosome,
RNA_degradation
details
CFinderM001429negative_regulation_of_transcription,_DNA-templated
FMN binding,
details
CFinderM001707glucose metabolic process,
valyl-tRNA aminoacylation,
negative_regulation_of_transcription,_DNA-templated
glucose-6-phosphate dehydrogenase activity,
aminoacyl-tRNA_editing_activity
valine-tRNA ligase activity,
Aminoacyl-tRNA_biosynthesis
Pentose_phosphate_pathway
Glutathione_metabolism
tRNA aminoacylation for protein translation,
details
CFinderM001890clathrin_coat_assembly
clathrin_coat
1-phosphatidylinositol_binding
clathrin_binding
RNA_degradation
regulation of transcription, DNA-dependent,
phospholipid binding,
details

4.Expression profilings