CFinderM001140's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
RB Transcription_Regulator(from iTAK)0.002249965GFam
nucleus,0.007953898GO:0005634
regulation_of_cell_cycle0.013478707GO:0051726
SNF2 Transcription_Regulator(from iTAK)0.013732663GFam
Drug_metabolism_-_cytochrome_P4500.028246147KEGG
Metabolism_of_xenobiotics_by_cytochrome_P4500.028246147KEGG
Glutathione_metabolism0.029033967KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000019G1620transcription regulatory protein SNF2, putativeAT2G46020 (0.00E+00)
PH01000391G0300Helicase/SANT-associated, DNA binding proteinAT3G24880 (0.00E+00)
PH01001468G0430CTC-interacting domain 4AT3G14010 (1.30E-67)
PH01002621G0030retinoblastoma-related 1AT3G12280 (0.00E+00)
PH01002777G0070Protein of unknown function, DUF584AT3G15040 (2.30E-14)
PH01002809G0260glutathione S-transferase phi 8AT2G47730 (6.70E-52)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000041Oxidative_phosphorylation
respiratory electron transport chain,
mitochondrial inner membrane,
details
CFinderM000324pyridoxine biosynthetic process,
S-adenosylmethionine_biosynthetic_process
GT8 GlycosylTransferases
pyridoxamine-phosphate oxidase activity,
oxidoreductase activity, acting on the CH-NH2 group of donors,
methionine adenosyltransferase activity,
details
CFinderM000481proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
SNF2 Transcription_Regulator(from iTAK)
Phagosome
Oxidative_phosphorylation
ATP hydrolysis coupled proton transport,
hydrogen ion transmembrane transporter activity,
RB Transcription_Regulator(from iTAK)
DDT Transcription_Regulator(from iTAK)
clathrin coat of trans-Golgi network vesicle,
clathrin coat of coated pit,
mediator complex,
PHD Transcription_Regulator(from iTAK)
details
CFinderM000617SNF2 Transcription_Regulator(from iTAK)
helicase activity,
DNA binding,
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides,
details
CFinderM001334proton-transporting V-type ATPase, V0 domain,
mediator complex,
proton-transporting two-sector ATPase complex, proton-transporting domain,
RNA metabolic process,
regulation of transcription from RNA polymerase II promoter,
ATP hydrolysis coupled proton transport,
details
CFinderM001337GT41 GlycosylTransferases
DDT Transcription_Regulator(from iTAK)
proton-transporting V-type ATPase, V0 domain,
ATP hydrolysis coupled proton transport,
RNA metabolic process,
details
CFinderM001410PHD Transcription_Regulator(from iTAK)
mediator complex,
proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
SNF2 Transcription_Regulator(from iTAK)
regulation of transcription from RNA polymerase II promoter,
ATP hydrolysis coupled proton transport,
RNA metabolic process,
zinc ion binding,
protein binding,
RNA_polymerase_II_transcription_cofactor_activity
N-acetyltransferase_activity
hydrogen ion transmembrane transporter activity,
DNA binding,
details
CFinderM001411proton-transporting V-type ATPase, V0 domain,
proton-transporting two-sector ATPase complex, proton-transporting domain,
RNA metabolic process,
ATP hydrolysis coupled proton transport,
details
CFinderM001589PHD Transcription_Regulator(from iTAK)
fructose-bisphosphate aldolase activity,
glycolysis,
details

4.Expression profilings