CFinderM001144's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
cullin-RING ubiquitin ligase complex,0.008407499GO:0031461

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000096G0240RING/U-box superfamily proteinAT4G03000 (1.50E-55)
PH01000102G1210-AT3G49990 (2.10E-74)
PH01000180G1130nucleoporin-relatedAT5G20200 (5.50E-11)
PH01000258G0100cullin 1AT4G02570 (1.00E-123)
PH01000408G0040cyclin-relatedAT3G19650 (2.00E-15)
PH01000469G0230C-terminal domain phosphatase-like 3AT2G33540 (1.40E-96)
PH01001151G0610-- (-)
PH01001278G0250-- (-)
PH01001871G0070NB-ARC domain-containing disease resistance proteinAT3G46730 (3.40E-56)
PH01006281G0010-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000057RLK-Pelle_LysM (from iTAK)
protein phosphorylation,
STE_STE20-Pl (from iTAK)
RLK-Pelle_LRR-VIII-1 (from iTAK)
transferase activity, transferring phosphorus-containing groups,
protein kinase activity,
regulation of ARF GTPase activity,
ATP binding,
ARF GTPase activator activity,
details
CFinderM000402spliceosomal complex,
nuclear mRNA splicing, via spliceosome,
GRAS Transcription_Regulator(from PlantTFDB)
protein binding,
Spliceosome
details
CFinderM000403GRAS Transcription_Regulator(from PlantTFDB)
details
CFinderM000496cullin-RING ubiquitin ligase complex,
ubiquitin protein ligase binding,
Pseudo ARR-B Transcription_Regulator(from iTAK)
ubiquitin-dependent protein catabolic process,
diphosphomevalonate decarboxylase activity,
L,L-diaminopimelate_aminotransferase_activity
Citrate_cycle_(TCA_cycle)
Pyruvate_metabolism
details
CFinderM000823ABC_transporters
details
CFinderM001195nucleic acid binding,
ARF Transcription_Regulator(from PlantTFDB)
B3-ARF Transcription_Regulator(from iTAK)
C3H Transcription_Regulator(from PlantTFDB)
endoplasmic reticulum,
response to hormone stimulus,
glycerol ether metabolic process,
Protein_processing_in_endoplasmic_reticulum
details

4.Expression profilings


Show details about module gene expression profiling