CFinderM001195's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
nucleic acid binding,0.014568012GO:0003676
ARF Transcription_Regulator(from PlantTFDB)0.018515853GFam
B3-ARF Transcription_Regulator(from iTAK)0.018515853GFam
C3H Transcription_Regulator(from PlantTFDB)0.024618466GFam
endoplasmic reticulum,0.039171861GO:0005783
response to hormone stimulus,0.039697073GO:0009725
glycerol ether metabolic process,0.039697073GO:0006662
Protein_processing_in_endoplasmic_reticulum0.040378107KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000238G0910thioredoxin family proteinAT2G47470 (2.00E-150)
PH01000469G0230C-terminal domain phosphatase-like 3AT2G33540 (1.40E-96)
PH01000530G0230Argonaute family proteinAT2G27040 (0.00E+00)
PH01000970G0100pumilio 5AT3G20250 (5.00E-165)
PH01001634G0410CwfJ-like family protein / zinc finger (CCCH-type) family proteinAT5G56900 (2.00E-175)
PH01002806G0200auxin response factor 2AT5G62000 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000043C3H Transcription_Regulator(from PlantTFDB)
DNA repair,
details
CFinderM000341exosome_(RNase_complex)
COP9_signalosome
details
CFinderM000940nucleic acid binding,
Ribosome_biogenesis_in_eukaryotes
details
CFinderM001014SET Transcription_Regulator(from iTAK)
endoplasmic reticulum,
nucleus,
ubiquitin ligase complex,
histone_methylation
details
CFinderM001144cullin-RING ubiquitin ligase complex,
details
CFinderM001187glycogen biosynthetic process,
'de novo' IMP biosynthetic process,
5-(carboxyamino)imidazole_ribonucleotide_mutase_activity
details
CFinderM001362Protein_processing_in_endoplasmic_reticulum
mannose biosynthetic process,
Lysine_degradation
SET Transcription_Regulator(from iTAK)
histone_methylation
phosphomannomutase activity,
histone_lysine_methylation
details
CFinderM001583endoplasmic reticulum,
bZIP Transcription_Regulator(from PlantTFDB)
details
CFinderM001584details
CFinderM001739mannose biosynthetic process,
phosphomannomutase activity,
ARF Transcription_Regulator(from PlantTFDB)
SNF2 Transcription_Regulator(from iTAK)
B3-ARF Transcription_Regulator(from iTAK)
details

4.Expression profilings