CFinderM001217's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Regulation_of_autophagy0.003184214KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000150G0830Cysteine proteinases superfamily proteinAT3G57810 (6.10E-70)
PH01000427G0780Ubiquitin-like superfamily proteinAT4G11740 (1.00E-103)
PH01000675G0560-- (-)
PH01001194G0420Peptidase family C54 proteinAT3G59950 (3.00E-107)
PH01001690G0240P-loop containing nucleoside triphosphate hydrolases superfamily proteinAT3G15120 (2.70E-49)
PH01005771G0040S-adenosyl-L-methionine-dependent methyltransferases superfamily proteinAT5G64030 (0)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000569CMGC_Pl-Tthe (from iTAK)
1,3-beta-D-glucan synthase activity,
1,3-beta-D-glucan synthase complex,
membrane,
Regulation_of_autophagy
details
CFinderM000884Protein_processing_in_endoplasmic_reticulum
GT48 GlycosylTransferases
HB-other Transcription_Regulator(from PlantTFDB)
HD-ZIP Transcription_Regulator(from PlantTFDB)
Nucleotide_excision_repair
proteasomal ubiquitin-dependent protein catabolic process,
outer membrane-bounded periplasmic space,
1,3-beta-D-glucan synthase complex,
(1->3)-beta-D-glucan biosynthetic process,
nucleotide-excision repair,
details
CFinderM000919mRNA_cleavage_factor_complex
mRNA_polyadenylation
phytochelatin biosynthetic process,
response to metal ion,
nitrogen compound metabolic process,
Styrene_degradation
Regulation_of_autophagy
Aminobenzoate_degradation
Tryptophan_metabolism
Cyanoamino_acid_metabolism
glutathione gamma-glutamylcysteinyltransferase activity,
mRNA_binding
Nitrogen_metabolism
C3H Transcription_Regulator(from PlantTFDB)
GNAT Transcription_Regulator(from iTAK)
details

4.Expression profilings