CFinderM001220's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
vesicle docking involved in exocytosis,0.016484276GO:0006904
Peroxisome0.0394767KEGG
Fatty_acid_metabolism0.0394767KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000252G0970-- (-)
PH01000352G1040secretory 1AAT1G02010 (8.70E-90)
PH01001012G0360-- (-)
PH01001222G0200long chain acyl-CoA synthetase 9AT1G77590 (0.00E+00)
PH01001641G0260-AT1G73020 (1.00E-171)
PH01002343G0150Transducin/WD40 repeat-like superfamily proteinAT1G10580 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000331details
CFinderM000713signal peptide processing,
tRNA modification,
tRNA_guanylyltransferase_activity
F-actin capping protein complex,
actin cytoskeleton organization,
WASH_complex
details
CFinderM000800cation:chloride_symporter_activity
SBP Transcription_Regulator(from PlantTFDB)
ion transport,
Endocytosis
details
CFinderM000840vesicle docking involved in exocytosis,
RNA modification,
pseudouridine synthesis,
translational initiation,
RNA_transport
pseudouridine synthase activity,
translation initiation factor activity,
vesicle-mediated transport,
details
CFinderM000868proteasome_regulatory_particle
Peroxisome
Proteasome
Fatty_acid_metabolism
details
CFinderM000952glucose-1-phosphate adenylyltransferase activity,
vesicle docking involved in exocytosis,
glycogen biosynthetic process,
details
CFinderM001048F-actin capping protein complex,
WASH_complex
actin cytoskeleton organization,
actin binding,
CK1_CK1 (from iTAK)
macromolecule biosynthetic process,
cytoplasm,
holo-[acyl-carrier-protein] synthase activity,
Pantothenate_and_CoA_biosynthesis
details
CFinderM001049microtubule associated complex,
microtubule-based movement,
microtubule motor activity,
PcG_protein_complex
F-actin capping protein complex,
Sesquiterpenoid_and_triterpenoid_biosynthesis
spindle pole,
WASH_complex
microtubule organizing center,
DNA polymerase III complex,
RLK-Pelle_RLCK-V (from iTAK)
CK1_CK1 (from iTAK)
Pantothenate_and_CoA_biosynthesis
macromolecule biosynthetic process,
details
CFinderM001224regulation of Rab GTPase activity,
microtubule-based movement,
details
CFinderM001365HSF Transcription_Regulator(from PlantTFDB)
CMGC_CDK-CRK7-CDK9 (from iTAK)
GT47 GlycosylTransferases
details
CFinderM001696phenylalanyl-tRNA aminoacylation,
microtubule,
mitochondrial outer membrane,
protein complex,
Fatty_acid_metabolism
Peroxisome
Aminoacyl-tRNA_biosynthesis
phenylalanine-tRNA ligase activity,
tRNA aminoacylation,
protein polymerization,
microtubule-based process,
tRNA binding,
details

4.Expression profilings