CFinderM001286's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
GH31 Glycoside_Hydrolases0.002530934GFam
ER_membrane_protein_complex0.00927661GO:0072546
phosphoacetylglucosamine mutase activity,0.023254728GO:0004610
RLK-Pelle_RLCK-VIIa-2 (from iTAK)0.025545359GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000003G3550catalyticsAT5G11560 (5.90E-27)
PH01000101G0290Glycosyl hydrolases family 31 proteinAT5G63840 (0.00E+00)
PH01000106G1470Cyclin A3;1AT5G43080 (2.50E-41)
PH01000196G0340-- (-)
PH01000332G0920SNARE-like superfamily proteinAT2G20930 (4.80E-66)
PH01000967G0510SEC7-like guanine nucleotide exchange family proteinAT1G01960 (5.50E-77)
PH01001808G0240Protein kinase superfamily proteinAT3G09830 (7.60E-37)
PH01003380G0040phosphoglucosamine mutase-relatedAT5G18070 (1.70E-27)
PH01008957G0020PDI-like 1-4AT5G60640 (2.50E-43)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000830cytoskeleton,
proton-transporting ATP synthase complex, catalytic core F(1),
phagocytosis,
branched chain family amino acid biosynthetic process,
signal peptide processing,
phosphoacetylglucosamine mutase activity,
Other_glycan_degradation
details
CFinderM000831ER_membrane_protein_complex
Protein_export
branched chain family amino acid biosynthetic process,
signal peptide processing,
dephosphorylation,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
acetolactate synthase activity,
peptidase activity,
phosphatase activity,
protein dephosphorylation,
details
CFinderM000872SWI/SNF-BAF60b Transcription_Regulator(from iTAK)
ER to Golgi vesicle-mediated transport,
regulation_of_cell_cycle
regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity
protein_kinase_binding
details

4.Expression profilings


Show details about module gene expression profiling