|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | HB-KNOX Transcription_Regulator(from iTAK) | 0.012495898 | GFam | | TALE Transcription_Regulator(from PlantTFDB) | 0.027277167 | GFam | | MYB_related Transcription_Regulator(from PlantTFDB) | 0.032993145 | GFam | | MYB-related Transcription_Regulator(from iTAK) | 0.032993145 | GFam | | Amino_sugar_and_nucleotide_sugar_metabolism | 0.039539236 | KEGG | | Glutathione_metabolism | 0.039539236 | KEGG | | SNARE_interactions_in_vesicular_transport | 0.039539236 | KEGG | | Ascorbate_and_aldarate_metabolism | 0.039539236 | KEGG |
2.Module member annotation
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000016 | protein phosphorylation,
protein kinase activity,
transferase activity, transferring phosphorus-containing groups,
protein serine/threonine kinase activity,
ATP binding,
RLK-Pelle_LRR-XII-1 (from iTAK)
RLK-Pelle_DLSV (from iTAK)
RLK-Pelle_WAK (from iTAK)
ADP_binding
polysaccharide_binding
transmembrane_transporter_activity
WRKY Transcription_Regulator(from PlantTFDB)
recognition of pollen,
transmembrane transport,
defense response,
RLK-Pelle_L-LEC (from iTAK)
membrane,
integral to membrane,
RLK-Pelle_SD-2b (from iTAK)
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
ATPase activity,
substrate-specific transmembrane transporter activity,
RLK-Pelle_LRR-XI-1 (from iTAK)
6-phosphofructokinase complex,
| details | | CFinderM000063 | SNARE_interactions_in_vesicular_transport
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
GTnc GlycosylTransferases
RLK-Pelle_LRR-XI-1 (from iTAK)
protein phosphorylation,
| details | | CFinderM000159 | chitin binding,
chitin catabolic process,
cell wall macromolecule catabolic process,
chitinase activity,
ATP binding,
ATPase activity,
SNARE_interactions_in_vesicular_transport
carbohydrate metabolic process,
protein phosphorylation,
transport,
transmembrane transport,
RLK-Pelle_LRR-VIII-1 (from iTAK)
RLK-Pelle_LRK10L-2 (from iTAK)
| details | | CFinderM000160 | RLK-Pelle_LRK10L-2 (from iTAK)
SNARE_interactions_in_vesicular_transport
transport,
cell wall macromolecule catabolic process,
chitin catabolic process,
transmembrane transport,
| details | | CFinderM000277 | Valine,_leucine_and_isoleucine_biosynthesis
Alanine,_aspartate_and_glutamate_metabolism
SNARE_interactions_in_vesicular_transport
fructose-bisphosphate aldolase activity,
glycolysis,
| details | | CFinderM000287 | thiamine biosynthetic process,
Pyruvate_metabolism
Carbon_fixation_in_photosynthetic_organisms
iron-sulfur cluster binding,
Zeatin_biosynthesis
Thiamine_metabolism
| details | | CFinderM000561 | GT4 GlycosylTransferases
NADP_biosynthetic_process
phosphorylation,
NAD+ kinase activity,
peptidyl-prolyl cis-trans isomerase activity,
| details | | CFinderM000562 | GT4 GlycosylTransferases
biosynthetic process,
| details | | CFinderM000642 | | details | | CFinderM000649 | B3 Transcription_Regulator(from PlantTFDB)
| details | | CFinderM000695 | STE_STE11 (from iTAK)
RLK-Pelle_RLCK-VIIa-1 (from iTAK)
SNARE_interactions_in_vesicular_transport
| details | | CFinderM000698 | RLK-Pelle_L-LEC (from iTAK)
cellular aldehyde metabolic process,
Caffeine_metabolism
Valine,_leucine_and_isoleucine_degradation
Lysine_degradation
Chloroalkane_and_chloroalkene_degradation
beta-Alanine_metabolism
SNARE_interactions_in_vesicular_transport
Limonene_and_pinene_degradation
Histidine_metabolism
Propanoate_metabolism
Tryptophan_metabolism
Drug_metabolism_-_other_enzymes
| details | | CFinderM000768 | peptidyl-prolyl cis-trans isomerase activity,
| details | | CFinderM000773 | GT4 GlycosylTransferases
phosphorylation,
magnesium_ion_transport
peptidyl-prolyl cis-trans isomerase activity,
magnesium_ion_transmembrane_transporter_activity
| details | | CFinderM000811 | RLK-Pelle_CrRLK1L-1 (from iTAK)
SNARE_interactions_in_vesicular_transport
| details | | CFinderM000892 | Valine,_leucine_and_isoleucine_degradation
cellular aldehyde metabolic process,
aldehyde dehydrogenase [NAD(P)+] activity,
| details | | CFinderM000907 | SNARE_interactions_in_vesicular_transport
| details | | CFinderM001013 | malate dehydrogenase (NADP+) activity,
pantoate-beta-alanine ligase activity,
pantothenate biosynthetic process,
malate dehydrogenase activity,
malate metabolic process,
oxidoreductase activity,
Pantothenate_and_CoA_biosynthesis
beta-Alanine_metabolism
Pyruvate_metabolism
Carbon_fixation_in_photosynthetic_organisms
Amino_sugar_and_nucleotide_sugar_metabolism
| details | | CFinderM001045 | membrane,
1,3-beta-D-glucan synthase complex,
Glutathione_metabolism
MYB_related Transcription_Regulator(from PlantTFDB)
Ascorbate_and_aldarate_metabolism
MYB-related Transcription_Regulator(from iTAK)
| details | | CFinderM001050 | SNARE_interactions_in_vesicular_transport
| details | | CFinderM001274 | mitochondrial ribosome,
protein folding,
SNARE_interactions_in_vesicular_transport
PHD Transcription_Regulator(from iTAK)
| details | | CFinderM001303 | 1,3-beta-D-glucan synthase complex,
Methane_metabolism
(1->3)-beta-D-glucan biosynthetic process,
drug transmembrane transport,
membrane,
antiporter activity,
drug transmembrane transporter activity,
1,3-beta-D-glucan synthase activity,
| details | | CFinderM001560 | HB-KNOX Transcription_Regulator(from iTAK)
GT48 GlycosylTransferases
| details | | CFinderM001561 | GT48 GlycosylTransferases
HB-KNOX Transcription_Regulator(from iTAK)
TKL-Pl-6 (from iTAK)
TALE Transcription_Regulator(from PlantTFDB)
1,3-beta-D-glucan synthase complex,
| details | | CFinderM001562 | HB-KNOX Transcription_Regulator(from iTAK)
sterol_24-C-methyltransferase_activity
TALE Transcription_Regulator(from PlantTFDB)
SNARE_interactions_in_vesicular_transport
Steroid_biosynthesis
MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
Ascorbate_and_aldarate_metabolism
| details | | CFinderM001687 | | details |
4.Expression profilings |
