|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | nucleoside-triphosphatase activity, | 0.008561766 | GO:0017111 | | ATPase activity, coupled to transmembrane movement of substances, | 0.008719687 | GO:0042626 | | GT47 GlycosylTransferases | 0.017483658 | GFam | | RLK-Pelle_CR4L (from iTAK) | 0.017483658 | GFam | | ABC_transporters | 0.02801013 | KEGG | | ATPase activity, | 0.028680828 | GO:0016887 | | ATP binding, | 0.028680828 | GO:0005524 | | nucleotide binding, | 0.031032628 | GO:0000166 | | SNF2 Transcription_Regulator(from iTAK) | 0.033411961 | GFam |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000109G1050 | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related | AT1G61140 (0.00E+00) | | PH01000144G1450 | peroxisomal ABC transporter 1 | AT4G39850 (0.00E+00) | | PH01000151G1330 | NB-ARC domain-containing disease resistance protein | AT3G46730 (1.90E-70) | | PH01000160G0990 | expansin A13 | AT3G03220 (1.20E-96) | | PH01000363G0710 | Exostosin family protein | AT2G35100 (9.00E-141) | | PH01000680G0470 | - | AT3G46220 (0.00E+00) | | PH01001015G0260 | AAA-type ATPase family protein | AT1G02890 (0) | | PH01001178G0490 | plant U-box 49 | AT5G67530 (0.00E+00) | | PH01001217G0130 | Protein kinase superfamily protein | AT3G51990 (3.40E-53) | | PH01001453G0210 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | AT3G52060 (6.60E-80) | | PH01001502G0450 | ABC transporter of the mitochondrion 3 | AT5G58270 (0.00E+00) | | PH01003339G0160 | RING/U-box superfamily protein | AT3G27710 (4.00E-143) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000442 | GATA Transcription_Regulator(from PlantTFDB)
C2C2-GATA Transcription_Regulator(from iTAK)
RLK-Pelle_LRR-VII-1 (from iTAK)
positive_regulation_of_transcription,_DNA-templated
| details | | CFinderM000810 | CAMTA Transcription_Regulator(from PlantTFDB)
glycerol-3-phosphate dehydrogenase complex,
Valine,_leucine_and_isoleucine_degradation
| details | | CFinderM000957 | DDT Transcription_Regulator(from iTAK)
CMGC_CDK-PITSLRE (from iTAK)
HB-HD-ZIP Transcription_Regulator(from iTAK)
HD-ZIP Transcription_Regulator(from PlantTFDB)
plant-type cell wall organization,
Ether_lipid_metabolism
Endocytosis
Glycerophospholipid_metabolism
extracellular region,
| details | | CFinderM001010 | RLK-Pelle_PERK-2 (from iTAK)
ethylene mediated signaling pathway,
endoplasmic reticulum membrane,
Plant_hormone_signal_transduction
protein histidine kinase activity,
Others Transcription_Regulator(from iTAK)
two-component sensor activity,
protein tyrosine kinase activity,
two-component signal transduction system (phosphorelay),
EIL Transcription_Regulator(from PlantTFDB)
two-component response regulator activity,
signal transducer activity,
sulfate assimilation,
| details | | CFinderM001053 | endoplasmic reticulum membrane,
ethylene mediated signaling pathway,
Others Transcription_Regulator(from iTAK)
protein histidine kinase activity,
Plant_hormone_signal_transduction
two-component sensor activity,
signal transducer activity,
two-component response regulator activity,
| details | | CFinderM001276 | GT8 GlycosylTransferases
plant-type cell wall organization,
extracellular region,
| details | | CFinderM001432 | RLK-Pelle_CR4L (from iTAK)
ubiquitin ligase complex,
Ubiquitin_mediated_proteolysis
regulation of ARF GTPase activity,
| details | | CFinderM001436 | STE_STE20-Fray (from iTAK)
CAMTA Transcription_Regulator(from PlantTFDB)
Ubiquitin_mediated_proteolysis
| details | | CFinderM001611 | CAMTA Transcription_Regulator(from PlantTFDB)
ABC_transporters
Phosphatidylinositol_signaling_system
Inositol_phosphate_metabolism
Phagosome
| details | | CFinderM001639 | intracellular_distribution_of_mitochondria
plant-type cell wall organization,
GT8 GlycosylTransferases
extracellular region,
SNF2 Transcription_Regulator(from iTAK)
| details | | CFinderM001826 | regulation of ARF GTPase activity,
| details | | CFinderM001870 | Basal_transcription_factors
SNF2 Transcription_Regulator(from iTAK)
transferase activity, transferring pentosyl groups,
| details |
4.Expression profilings |
