|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis | 0.00206279 | KEGG | | cysteine biosynthetic process from serine, | 0.007727608 | GO:0006535 | | aromatic amino acid family biosynthetic process, | 0.007727608 | GO:0009073 | | Sulfur_metabolism | 0.012355481 | KEGG | | serine O-acetyltransferase activity, | 0.016301791 | GO:0009001 | | 3-deoxy-7-phosphoheptulonate synthase activity, | 0.016301791 | GO:0003849 | | Cysteine_and_methionine_metabolism | 0.0263178 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000029G0270 | cytochrome P450, family 94, subfamily D, polypeptide 2 | AT3G56630 (2.00E-137) | | PH01000104G0950 | Class-II DAHP synthetase family protein | AT1G22410 (0) | | PH01000243G0050 | Trimeric LpxA-like enzymes superfamily protein | AT2G17640 (3.00E-105) | | PH01000750G0190 | Vps51/Vps67 family (components of vesicular transport) protein | AT4G02030 (0.00E+00) | | PH01000810G0670 | phosphoinositide 4-kinase gamma 7 | AT2G03890 (0) | | PH01002865G0070 | - | - (-) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000206 | mitochondrial inner membrane presequence translocase complex,
P-P-bond-hydrolysis-driven protein transmembrane transporter activity,
Others Transcription_Regulator(from iTAK)
two-component response regulator activity,
Protein_processing_in_endoplasmic_reticulum
| details | | CFinderM000330 | GT96 GlycosylTransferases
ER_membrane_protein_complex
| details | | CFinderM000418 | tRNA aminoacylation for protein translation,
| details | | CFinderM001099 | HSF Transcription_Regulator(from PlantTFDB)
cellular process,
| details | | CFinderM001264 | cis-Golgi network,
Rab GDP-dissociation inhibitor activity,
C2H2 Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001290 | Protein_processing_in_endoplasmic_reticulum
AGC_NDR (from iTAK)
| details | | CFinderM001311 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
serine-type peptidase activity,
CAMK_CDPK (from iTAK)
histone modification,
phospholipid biosynthetic process,
aromatic amino acid family biosynthetic process,
phosphatidylserine decarboxylase activity,
3-deoxy-7-phosphoheptulonate synthase activity,
| details | | CFinderM001347 | ubiquitin-dependent protein catabolic process,
| details | | CFinderM001398 | cis-Golgi network,
vesicle docking involved in exocytosis,
exocyst,
| details | | CFinderM001420 | heat shock protein binding,
Protein_processing_in_endoplasmic_reticulum
unfolded protein binding,
CAMK_CDPK (from iTAK)
response to heat,
protein folding,
| details | | CFinderM001496 | Sulfur_relay_system
Thiamine_metabolism
COPI vesicle coat,
clathrin adaptor complex,
cysteine desulfurase activity,
cysteine metabolic process,
retrograde vesicle-mediated transport, Golgi to ER,
| details | | CFinderM001644 | ER_membrane_protein_complex
RNA_degradation
| details | | CFinderM001672 | STE_STE11 (from iTAK)
| details | | CFinderM001863 | Golgi apparatus,
clathrin adaptor complex,
membrane coat,
binding,
Protein_processing_in_endoplasmic_reticulum
protein transporter activity,
| details |
4.Expression profilings |
