CFinderM001311's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Phenylalanine,_tyrosine_and_tryptophan_biosynthesis0.006528189KEGG
serine-type peptidase activity,0.010622269GO:0008236
CAMK_CDPK (from iTAK)0.030430396GFam
histone modification,0.043461063GO:0016570
phospholipid biosynthetic process,0.043461063GO:0008654
aromatic amino acid family biosynthetic process,0.043461063GO:0009073
phosphatidylserine decarboxylase activity,0.049015147GO:0004609
3-deoxy-7-phosphoheptulonate synthase activity,0.049015147GO:0003849

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000030G1730phosphoinositide 4-kinase gamma 7AT2G03890 (0)
PH01000058G1870phosphatidylserine decarboxylase 2AT5G57190 (5.00E-173)
PH01000104G0950Class-II DAHP synthetase family proteinAT1G22410 (0)
PH01000370G0970Calcium-dependent protein kinase family proteinAT2G17290 (0.00E+00)
PH01000554G0580Tetratricopeptide repeat (TPR)-like superfamily proteinAT3G04750 (6.00E-155)
PH01001009G0130plus-3 domain-containing proteinAT1G61040 (6.00E-142)
PH01001495G0380FRIGIDA-like proteinAT5G48385 (2.00E-134)
PH01001914G0250BTB-POZ and MATH domain 2AT3G06190 (4.70E-82)
PH01001973G0250-- (-)
PH01002213G0170Zinc finger protein 622AT4G31420 (1.90E-73)
PH01002983G0240Ubiquitin-like superfamily proteinAT4G01000 (3.90E-22)
PH01003574G0070polypyrimidine tract-binding protein 1AT3G01150 (2.10E-42)
PH01003704G0280RING/U-box superfamily proteinAT1G55530 (9.70E-65)
PH01004033G0010-- (-)
PH01004090G0100plastidic type i signal peptidase 1AT3G24590 (4.60E-37)
PH01004589G0100Transducin/WD40 repeat-like superfamily proteinAT4G00090 (1.00E-136)
PH01005306G0040zinc ion bindingAT3G54360 (6.00E-122)
PH01007082G0010RING/U-box superfamily proteinAT4G34100 (2.60E-53)
PH01007935G0020-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000163SET Transcription_Regulator(from iTAK)
histone_methylation
histone_lysine_methylation
nucleus,
RNA-directed RNA polymerase activity,
zinc ion binding,
histone_binding
histone-lysine N-methyltransferase activity,
details
CFinderM000597GH100 Glycoside_Hydrolases
RLK-Pelle_SD-2b (from iTAK)
details
CFinderM000916bZIP Transcription_Regulator(from PlantTFDB)
Protein_export
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
details
CFinderM000924Ribosome_biogenesis_in_eukaryotes
Protein_export
omega_peptidase_activity
ribosome biogenesis,
details
CFinderM001040proteasomal ubiquitin-dependent protein catabolic process,
nucleotide-excision repair,
chloride transport,
damaged DNA binding,
ion channel activity,
voltage-gated chloride channel activity,
Nucleotide_excision_repair
details
CFinderM001165acyl-CoA_hydrolase_activity
acyl-CoA metabolic process,
histone modification,
translational initiation,
transcription initiation, DNA-dependent,
details
CFinderM001200GH100 Glycoside_Hydrolases
Lipoic_acid_metabolism
octanoyltransferase activity,
glycopeptide_alpha-N-acetylgalactosaminidase_activity
lipoate biosynthetic process,
Protein_export
cellular protein modification process,
serine-type peptidase activity,
details
CFinderM001290Protein_processing_in_endoplasmic_reticulum
AGC_NDR (from iTAK)
details
CFinderM001309Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
cysteine biosynthetic process from serine,
aromatic amino acid family biosynthetic process,
Sulfur_metabolism
serine O-acetyltransferase activity,
3-deoxy-7-phosphoheptulonate synthase activity,
Cysteine_and_methionine_metabolism
details
CFinderM001351GH100 Glycoside_Hydrolases
Protein_export
glycopeptide_alpha-N-acetylgalactosaminidase_activity
serine-type peptidase activity,
details
CFinderM001420heat shock protein binding,
Protein_processing_in_endoplasmic_reticulum
unfolded protein binding,
CAMK_CDPK (from iTAK)
response to heat,
protein folding,
details
CFinderM001479GT31 GlycosylTransferases
CAMK_CDPK (from iTAK)
protein glycosylation,
details
CFinderM001481details
CFinderM001482Protein_processing_in_endoplasmic_reticulum
details
CFinderM001775myosin complex,
TBP-class_protein_binding
Fructose_and_mannose_metabolism
Basal_transcription_factors
Amino_sugar_and_nucleotide_sugar_metabolism
motor activity,
details

4.Expression profilings


Show details about module gene expression profiling