CFinderM001315's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
STE_STE-Pl (from iTAK)0.000437541GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000047G1060Rho GTPase activation protein (RhoGAP) with PH domainAT5G19390 (8.00E-107)
PH01000140G0530Leucine-rich repeat (LRR) family proteinAT3G15410 (1.40E-84)
PH01000160G0470Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domainAT1G58250 (0)
PH01001359G0120mitogen-activated protein kinase kinase kinase 7AT3G13530 (3.00E-125)
PH01001359G0150mitogen-activated protein kinase kinase kinase 7AT3G13530 (0.00E+00)
PH01001450G0190Late embryogenesis abundant protein (LEA) family proteinAT3G62580 (1.30E-83)
PH01003052G0100-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000624proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
ATP hydrolysis coupled proton transport,
hydrogen ion transmembrane transporter activity,
HB-other Transcription_Regulator(from PlantTFDB)
details
CFinderM001077SNARE_interactions_in_vesicular_transport
details
CFinderM001204Mre11 complex,
nucleolus,
DNA repair,
details
CFinderM001463alpha-Linolenic_acid_metabolism
Fatty_acid_metabolism
GRAS Transcription_Regulator(from PlantTFDB)
fatty acid metabolic process,
3-hydroxyacyl-CoA_dehydrogenase_activity
details
CFinderM001527PHD Transcription_Regulator(from iTAK)
guanyl-nucleotide exchange factor activity,
details
CFinderM001541Terpenoid_backbone_biosynthesis
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity,
1,3-beta-D-glucan synthase complex,
(1->3)-beta-D-glucan biosynthetic process,
terpenoid biosynthetic process,
iron-sulfur cluster assembly,
details
CFinderM001542guanyl-nucleotide exchange factor activity,
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity,
small GTPase mediated signal transduction,
signal transduction,
terpenoid biosynthetic process,
cellular component organization,
Terpenoid_backbone_biosynthesis
actin cytoskeleton organization,
intracellular,
details
CFinderM001659protein import into nucleus,
nuclear pore,
details
CFinderM001660SNARE_interactions_in_vesicular_transport
details
CFinderM001661RNA_transport
RNA metabolic process,
details
CFinderM001861SNARE_interactions_in_vesicular_transport
acid-amino acid ligase activity,
Ubiquitin_mediated_proteolysis
mRNA_surveillance_pathway
details

4.Expression profilings