|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | selenium binding, | 0.020415239 | GO:0008430 | | dephosphorylation, | 0.025738575 | GO:0016311 | | protein tyrosine/serine/threonine phosphatase activity, | 0.029442629 | GO:0008138 | | protein tyrosine phosphatase activity, | 0.029442629 | GO:0004725 | | Endocytosis | 0.032892728 | KEGG | | mRNA_surveillance_pathway | 0.032892728 | KEGG | | phosphatase activity, | 0.042385774 | GO:0016791 | | protein dephosphorylation, | 0.043041949 | GO:0006470 | | cell redox homeostasis, | 0.043912148 | GO:0045454 |
2.Module member annotation
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000906 | HSF Transcription_Regulator(from PlantTFDB)
protein ADP-ribosylation,
dephosphorylation,
protein methylation,
Base_excision_repair
| details | | CFinderM000918 | GT48 GlycosylTransferases
RLK-Pelle_RLCK-V (from iTAK)
TKL-Pl-4 (from iTAK)
microtubule cytoskeleton organization,
(1->3)-beta-D-glucan biosynthetic process,
cytokinesis
1,3-beta-D-glucan synthase complex,
mRNA_surveillance_pathway
| details | | CFinderM000959 | RLK-Pelle_PERK-1 (from iTAK)
| details | | CFinderM001198 | RLK-Pelle_RLCK-VI (from iTAK)
Oxidative_phosphorylation
| details | | CFinderM001329 | Endocytosis
selenium binding,
dephosphorylation,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
protein dephosphorylation,
cell redox homeostasis,
| details | | CFinderM001331 | protein dephosphorylation,
microtubule organizing center,
spindle pole,
dephosphorylation,
microtubule cytoskeleton organization,
C2H2 Transcription_Regulator(from PlantTFDB)
isoprenoid biosynthetic process,
selenium binding,
| details | | CFinderM001698 | Steroid_biosynthesis
endodeoxyribonuclease activity, producing 5'-phosphomonoesters,
sterol_24-C-methyltransferase_activity
single-stranded DNA binding,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
WRKY Transcription_Regulator(from PlantTFDB)
dephosphorylation,
steroid biosynthetic process,
| details | | CFinderM001790 | regulation of translational initiation,
ribosome binding,
eukaryotic translation initiation factor 3 complex,
translation initiation factor activity,
| details | | CFinderM001845 | protein complex,
microtubule,
PLATZ Transcription_Regulator(from iTAK)
Phagosome
mRNA_surveillance_pathway
CAMK_CAMKL-CHK1 (from iTAK)
protein polymerization,
microtubule-based process,
dephosphorylation,
| details | | CFinderM001878 | isoprenoid biosynthetic process,
mRNA_surveillance_pathway
C2H2 Transcription_Regulator(from PlantTFDB)
fatty-acyl-CoA binding,
| details | | CFinderM001884 | single-stranded DNA binding,
DNA_replication
RNA processing,
| details | | CFinderM001886 | Steroid_biosynthesis
ubiquitin ligase complex,
sterol_24-C-methyltransferase_activity
dephosphorylation,
steroid biosynthetic process,
mRNA_surveillance_pathway
protein ubiquitination,
protein dephosphorylation,
| details | | CFinderM001897 | phosphatase activity,
mRNA_surveillance_pathway
dephosphorylation,
protein dephosphorylation,
protein ubiquitination,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
ubiquitin ligase complex,
| details |
4.Expression profilings |
