|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | GT41 GlycosylTransferases | 0.000562535 | GFam | | positive regulation of translational elongation, | 0.003644922 | GO:0045901 | | positive regulation of translational termination, | 0.003644922 | GO:0045905 | | translational frameshifting, | 0.003644922 | GO:0006452 | | peptidyl-lysine modification to hypusine, | 0.004294458 | GO:0008612 | | RNA_degradation | 0.020270217 | KEGG | | protein binding, | 0.022104414 | GO:0005515 | | ribosome binding, | 0.022104414 | GO:0043022 | | translation elongation factor activity, | 0.028312432 | GO:0003746 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000006G0760 | eukaryotic elongation factor 5A-1 | AT1G13950 (5.20E-77) | | PH01000299G0650 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT3G11540 (0.00E+00) | | PH01002929G0150 | Ubiquitin-like superfamily protein | AT5G42220 (1.20E-81) | | PH01003018G0160 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT3G11540 (0.00E+00) | | PH01003584G0130 | tRNA arginine adenosine deaminase | AT1G68720 (7.70E-61) | | PH01004289G0050 | Transducin/WD40 repeat-like superfamily protein | AT3G13300 (0) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000945 | Protein_processing_in_endoplasmic_reticulum
| details | | CFinderM001291 | ubiquitin-dependent protein catabolic process,
| details | | CFinderM001337 | GT41 GlycosylTransferases
DDT Transcription_Regulator(from iTAK)
proton-transporting V-type ATPase, V0 domain,
ATP hydrolysis coupled proton transport,
RNA metabolic process,
| details | | CFinderM001459 | protein binding,
protein folding,
peptidyl-prolyl cis-trans isomerase activity,
nucleic acid binding,
Nucleotide_excision_repair
RNA_degradation
Ubiquitin_mediated_proteolysis
| details | | CFinderM001777 | Ubiquitin_mediated_proteolysis
protein folding,
| details |
4.Expression profilings |
