CFinderM001353's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
TKL-Pl-7 (from iTAK)0.003092977GFam
Others Transcription_Regulator(from iTAK)0.039740739GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000023G0830histone mono-ubiquitination 1AT2G44950 (3.00E-142)
PH01000054G2270SAC3/GANP/Nin1/mts3/eIF-3 p25 familyAT2G39340 (0.00E+00)
PH01000061G0380-- (-)
PH01000313G0880copper ion bindingAT4G05400 (1.70E-61)
PH01000465G0520Protein kinase superfamily proteinAT5G58520 (7.00E-180)
PH01000766G0350-AT1G03290 (1.00E-51)
PH01000900G0010-- (-)
PH01001295G0420Tudor/PWWP/MBT superfamily proteinAT3G03140 (5.60E-66)
PH01001488G0340-AT5G11700 (1.00E-120)
PH01001988G0200SIN3-like 3AT1G24190 (0)
PH01005664G0010ubiquitin-specific protease 18AT4G31670 (2.70E-69)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000352Ribosome
translation,
Ribosome
intracellular,
structural constituent of ribosome,
translational initiation,
transcription, DNA-dependent,
RNA_polymerase
details
CFinderM000623intracellular,
Ribosome
translation,
structural constituent of ribosome,
HB-other Transcription_Regulator(from PlantTFDB)
details
CFinderM000883sterol metabolic process,
nuclear chromosome,
cholestenol delta-isomerase activity,
Nitrogen_metabolism
Steroid_biosynthesis
details
CFinderM001024poly(A)+ mRNA export from nucleus,
nuclear pore,
details
CFinderM001594Steroid_biosynthesis
cholestenol delta-isomerase activity,
sterol metabolic process,
details
CFinderM001788protein folding,
protein catabolic process,
details
CFinderM001812intracellular transport,
5'-3' exoribonuclease activity,
nucleobase-containing compound metabolic process,
exonuclease activity,
Ribosome_biogenesis_in_eukaryotes
RNA_degradation
details
CFinderM001816transcription factor TFIIF complex,
Basal_transcription_factors
transcription initiation from RNA polymerase II promoter,
protein catabolic process,
details
CFinderM001835MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
nuclear chromosome,
chromatin binding,
details

4.Expression profilings


Show details about module gene expression profiling