CFinderM001360's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
cysteine-type peptidase activity,0.039697073GO:0008234
galactosyltransferase activity,0.039697073GO:0008378
protein glycosylation,0.041953461GO:0006486

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000105G0750Cysteine proteinases superfamily proteinAT1G10570 (7.90E-37)
PH01000281G0950damaged DNA binding 2AT5G58760 (1.10E-69)
PH01001398G0260-- (-)
PH01002161G0290-- (-)
PH01002459G0300galactosyltransferase1AT1G26810 (3.30E-43)
PH01003505G0200Protein of unknown function (DUF1682)AT4G24330 (6.00E-117)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000170cullin-RING ubiquitin ligase complex,
ubiquitin protein ligase binding,
ubiquitin-dependent protein catabolic process,
details
CFinderM000229GT2 GlycosylTransferases
NuA4_histone_acetyltransferase_complex
histone_H2A_acetylation
protein homooligomerization,
histone_H4_acetylation
chromatin remodeling,
negative_regulation_of_transcription,_DNA-templated
RNA modification,
pseudouridine synthesis,
details
CFinderM000389protein folding,
response to heat,
unfolded protein binding,
details
CFinderM000453carbon fixation,
response to wounding,
Lysine_degradation
SET Transcription_Regulator(from iTAK)
details
CFinderM000501oligosaccharide metabolic process,
mannosyl-oligosaccharide glucosidase activity,
Peroxisome
N-Glycan_biosynthesis
details
CFinderM000540condensin_complex
CK1_CK1 (from iTAK)
mitotic_chromosome_condensation
details
CFinderM000627DNA primase activity,
DNA_replication
details
CFinderM000734WASH_complex
cytoskeleton,
phagocytosis,
malate metabolic process,
cellular carbohydrate metabolic process,
malate dehydrogenase activity,
L-malate dehydrogenase activity,
details
CFinderM000760CMGC_CLK (from iTAK)
cullin-RING ubiquitin ligase complex,
cytoplasm,
SET Transcription_Regulator(from iTAK)
details
CFinderM000898WASH_complex
cullin-RING ubiquitin ligase complex,
PHD Transcription_Regulator(from iTAK)
mitotic_spindle_assembly_checkpoint
ubiquitin protein ligase binding,
cysteine-type peptidase activity,
protein serine/threonine phosphatase activity,
details
CFinderM001015DNA primase activity,
details
CFinderM001203SNARE_interactions_in_vesicular_transport
ubiquitin-dependent protein catabolic process,
details
CFinderM001242mitotic_spindle_assembly_checkpoint
WASH_complex
PHD Transcription_Regulator(from iTAK)
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
details
CFinderM001248DNA primase activity,
details
CFinderM001253CMGC_CLK (from iTAK)
membrane,
details
CFinderM001261thymidylate synthase activity,
dihydrofolate reductase activity,
dTMP biosynthetic process,
ribosome biogenesis,
nucleotidyltransferase activity,
details
CFinderM001424WASH_complex
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
Peroxisome
details
CFinderM001581WASH_complex
DNA_ligation_involved_in_DNA_repair
drug_binding
DNA_ligase_activity
DNA ligase (ATP) activity,
DNA recombination,
DNA repair,
details
CFinderM001799Various_types_of_N-glycan_biosynthesis
Base_excision_repair
N-Glycan_biosynthesis
nuclease activity,
endonuclease activity,
NAC Transcription_Regulator(from PlantTFDB)
details

4.Expression profilings