CFinderM001376's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
cis-Golgi network,0.005622275GO:0005801
cell communication,0.006745676GO:0007154
phosphatidylinositol binding,0.018737988GO:0035091

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000004G1680sorting nexin 1AT5G06140 (7.00E-120)
PH01000017G1500Tetratricopeptide repeat (TPR)-like superfamily proteinAT3G53170 (1.00E-125)
PH01000090G1040-- (-)
PH01000144G1610Mitochondrial substrate carrier family proteinAT5G42130 (8.50E-87)
PH01000949G0570sec34-like family proteinAT1G73430 (0.00E+00)
PH01006080G0030-AT4G14615 (2.40E-24)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000764RNA-dependent DNA replication,
RNA-directed DNA polymerase activity,
protein import into mitochondrial outer membrane,
vacuolar transport,
mitochondrial outer membrane translocase complex,
retromer complex,
cell communication,
mTERF Transcription_Regulator(from iTAK)
myosin complex,
phosphoric ester hydrolase activity,
phosphatidylinositol binding,
motor activity,
RNA binding,
details
CFinderM001122cis-Golgi network,
translational initiation,
RNA_transport
details
CFinderM001264cis-Golgi network,
Rab GDP-dissociation inhibitor activity,
C2H2 Transcription_Regulator(from PlantTFDB)
details
CFinderM001374Others Transcription_Regulator(from iTAK)
details
CFinderM001375nucleus,
Others Transcription_Regulator(from iTAK)
transcription cofactor activity,
histone acetyltransferase activity,
ubiquitin-dependent protein catabolic process,
regulation of transcription, DNA-dependent,
ubiquitin thiolesterase activity,
details
CFinderM001398cis-Golgi network,
vesicle docking involved in exocytosis,
exocyst,
details
CFinderM001461HMG Transcription_Regulator(from iTAK)
base-excision repair,
4 iron, 4 sulfur cluster binding,
endonuclease activity,
details
CFinderM001863Golgi apparatus,
clathrin adaptor complex,
membrane coat,
binding,
Protein_processing_in_endoplasmic_reticulum
protein transporter activity,
details

4.Expression profilings