|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | phosphatidylinositol-mediated signaling, | 0.008261516 | GO:0048015 | | RNA 3'-end processing, | 0.008261516 | GO:0031123 | | RNA polyadenylation, | 0.008261516 | GO:0043631 | | phosphatidylinositol_biosynthetic_process | 0.008261516 | GO:0006661 | | phosphatidylinositol phosphorylation, | 0.008261516 | GO:0046854 | | 1-phosphatidylinositol_4-kinase_activity | 0.018686659 | GO:0004430 | | Inositol_phosphate_metabolism | 0.028246147 | KEGG | | Phosphatidylinositol_signaling_system | 0.028246147 | KEGG | | mRNA_surveillance_pathway | 0.040202223 | KEGG | | polynucleotide adenylyltransferase activity, | 0.046672859 | GO:0004652 |
2.Module member annotation
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000256 | signal recognition particle,
proton-transporting two-sector ATPase complex, proton-transporting domain,
| details | | CFinderM000760 | CMGC_CLK (from iTAK)
cullin-RING ubiquitin ligase complex,
cytoplasm,
SET Transcription_Regulator(from iTAK)
| details | | CFinderM000837 | glutamyl-tRNA aminoacylation,
guanosine tetraphosphate metabolic process,
tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
Porphyrin_and_chlorophyll_metabolism
glutamate-tRNA ligase activity,
ligase activity, forming aminoacyl-tRNA and related compounds,
tRNA binding,
tRNA aminoacylation for protein translation,
| details | | CFinderM001081 | proteasome complex,
regulation of protein catabolic process,
enzyme regulator activity,
Rcd1-like Transcription_Regulator(from iTAK)
Proteasome
binding,
transcription factor TFIID complex,
glycyl-tRNA aminoacylation,
RLK-Pelle_LRR-XII-1 (from iTAK)
glycine-tRNA ligase activity,
| details | | CFinderM001242 | mitotic_spindle_assembly_checkpoint
WASH_complex
PHD Transcription_Regulator(from iTAK)
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
| details | | CFinderM001401 | Plant_hormone_signal_transduction
bZIP Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001581 | WASH_complex
DNA_ligation_involved_in_DNA_repair
drug_binding
DNA_ligase_activity
DNA ligase (ATP) activity,
DNA recombination,
DNA repair,
| details | | CFinderM001638 | tRNA methylation,
tRNA (guanine-N1-)-methyltransferase activity,
proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
NAC Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001650 | sphingolipid metabolic process,
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
glucosylceramidase activity,
Butanoate_metabolism
Pyruvate_metabolism
Citrate_cycle_(TCA_cycle)
Glycolysis_/_Gluconeogenesis
serine-type carboxypeptidase activity,
nucleotidyltransferase activity,
| details | | CFinderM001675 | GT47 GlycosylTransferases
dephosphorylation,
Butanoate_metabolism
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
Pyruvate_metabolism
Citrate_cycle_(TCA_cycle)
Glycolysis_/_Gluconeogenesis
| details | | CFinderM001789 | proton-transporting V-type ATPase, V0 domain,
proton-transporting two-sector ATPase complex, proton-transporting domain,
C3H Transcription_Regulator(from PlantTFDB)
ATP hydrolysis coupled proton transport,
DNA repair,
nuclease activity,
endonuclease activity,
hydrogen ion transmembrane transporter activity,
| details | | CFinderM001799 | Various_types_of_N-glycan_biosynthesis
Base_excision_repair
N-Glycan_biosynthesis
nuclease activity,
endonuclease activity,
NAC Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001830 | WASH_complex
drug_binding
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
Butanoate_metabolism
Pyruvate_metabolism
Citrate_cycle_(TCA_cycle)
Glycolysis_/_Gluconeogenesis
| details |
4.Expression profilings |
