CFinderM001415's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
PHD Transcription_Regulator(from iTAK)0.008224126GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000181G0700-AT1G56423 (2.00E-80)
PH01000181G1330ubiquitin-conjugating enzyme 32AT3G17000 (7.90E-92)
PH01000553G0200Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinAT5G51150 (0.00E+00)
PH01001685G0420alpha/beta-Hydrolases superfamily proteinAT1G10740 (5.00E-172)
PH01002369G0040Ribosomal RNA processing Brix domain proteinAT1G63780 (2.00E-119)
PH01005326G0050RING/U-box proteinAT3G05670 (1.80E-61)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000144protein binding,
acid-amino acid ligase activity,
details
CFinderM000408Group-Pl-3 (from iTAK)
histidine_catabolic_process_to_glutamate_and_formamide
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides,
details
CFinderM000587protein binding,
acid-amino acid ligase activity,
details
CFinderM000940nucleic acid binding,
Ribosome_biogenesis_in_eukaryotes
details
CFinderM001079SOS_response
DNA metabolic process,
cellular protein metabolic process,
details
CFinderM001110Ubiquitin_mediated_proteolysis
acid-amino acid ligase activity,
protein neddylation,
cellular protein modification process,
small protein activating enzyme activity,
details
CFinderM001131details
CFinderM001414PHD Transcription_Regulator(from iTAK)
details
CFinderM001435Jumonji Transcription_Regulator(from iTAK)
PHD Transcription_Regulator(from iTAK)
RNA_transport
details
CFinderM001452'de novo' IMP biosynthetic process,
5-(carboxyamino)imidazole_ribonucleotide_mutase_activity
details
CFinderM001510Ribosome_biogenesis_in_eukaryotes
RNA processing,
acid-amino acid ligase activity,
details
CFinderM001516Ribosome_biogenesis_in_eukaryotes
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
details
CFinderM001519details
CFinderM001718phosphoribosyl-AMP cyclohydrolase activity,
histidine biosynthetic process,
RNA modification,
pseudouridine synthesis,
nuclear pore,
details
CFinderM001802Alanine,_aspartate_and_glutamate_metabolism
cell wall biogenesis,
purine nucleotide biosynthetic process,
galactoside 2-alpha-L-fucosyltransferase activity,
adenylosuccinate synthase activity,
WRKY Transcription_Regulator(from PlantTFDB)
RNA-dependent DNA replication,
Purine_metabolism
nucleosome assembly,
details

4.Expression profilings