CFinderM001420's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
heat shock protein binding,0.001357001GO:0031072
Protein_processing_in_endoplasmic_reticulum0.004054551KEGG
unfolded protein binding,0.017851762GO:0051082
CAMK_CDPK (from iTAK)0.022515087GFam
response to heat,0.041700067GO:0009408
protein folding,0.041700067GO:0006457

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000001G3500Major facilitator superfamily proteinAT5G64500 (1.40E-77)
PH01000005G4070FRIGIDA-like proteinAT5G48385 (1.00E-138)
PH01000010G0140Tetratricopeptide repeat (TPR)-like superfamily proteinAT4G35130 (0.00E+00)
PH01000060G0460Putative adipose-regulatory protein (Seipin)AT1G29760 (5.80E-30)
PH01000181G0770Prolyl oligopeptidase family proteinAT2G47390 (0.00E+00)
PH01000370G0970Calcium-dependent protein kinase family proteinAT2G17290 (0.00E+00)
PH01000391G0470-- (-)
PH01000810G0670phosphoinositide 4-kinase gamma 7AT2G03890 (0)
PH01001453G0080DNAJ homologue 3AT3G44110 (8.00E-137)
PH01001495G0380FRIGIDA-like proteinAT5G48385 (2.00E-134)
PH01001654G02505-AMP-activated protein kinase beta-2 subunit proteinAT5G21170 (1.60E-55)
PH01001759G0130exocyst subunit exo70 family protein A1AT5G03540 (0.00E+00)
PH01002634G0180DNAJ homologue 3AT3G44110 (0.00E+00)
PH01003574G0070polypyrimidine tract-binding protein 1AT3G01150 (2.10E-42)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000101RLK-Pelle_RLCK-VIIa-2 (from iTAK)
response to heat,
details
CFinderM000163SET Transcription_Regulator(from iTAK)
histone_methylation
histone_lysine_methylation
nucleus,
RNA-directed RNA polymerase activity,
zinc ion binding,
histone_binding
histone-lysine N-methyltransferase activity,
details
CFinderM000190pyridoxine biosynthetic process,
S-adenosylmethionine_biosynthetic_process
proteolysis,
pyridoxamine-phosphate oxidase activity,
methionine adenosyltransferase activity,
oxidoreductase activity, acting on the CH-NH2 group of donors,
aminopeptidase activity,
serine-type peptidase activity,
FMN binding,
details
CFinderM000195pyridoxine biosynthetic process,
S-adenosylmethionine_biosynthetic_process
proteolysis,
pyridoxamine-phosphate oxidase activity,
oxidoreductase activity, acting on the CH-NH2 group of donors,
methionine adenosyltransferase activity,
Endocytosis
aminopeptidase activity,
details
CFinderM000236NAK (from iTAK)
STAT Transcription_Regulator(from PlantTFDB)
Glycine,_serine_and_threonine_metabolism
magnesium_ion_transport
TKL-Pl-5 (from iTAK)
magnesium_ion_transmembrane_transporter_activity
details
CFinderM000933TKL-Pl-4 (from iTAK)
Others Transcription_Regulator(from iTAK)
response to heat,
Protein_processing_in_endoplasmic_reticulum
details
CFinderM001090GT14 GlycosylTransferases
proteolysis,
membrane,
aminopeptidase activity,
details
CFinderM001101SET Transcription_Regulator(from iTAK)
histone_methylation
histone_lysine_methylation
Lysine_degradation
nucleus,
ubiquitin ligase complex,
histone-lysine N-methyltransferase activity,
histone_binding
RNA_degradation
transcription, DNA-dependent,
protein ubiquitination,
details
CFinderM001290Protein_processing_in_endoplasmic_reticulum
AGC_NDR (from iTAK)
details
CFinderM001309Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
cysteine biosynthetic process from serine,
aromatic amino acid family biosynthetic process,
Sulfur_metabolism
serine O-acetyltransferase activity,
3-deoxy-7-phosphoheptulonate synthase activity,
Cysteine_and_methionine_metabolism
details
CFinderM001311Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
serine-type peptidase activity,
CAMK_CDPK (from iTAK)
histone modification,
phospholipid biosynthetic process,
aromatic amino acid family biosynthetic process,
phosphatidylserine decarboxylase activity,
3-deoxy-7-phosphoheptulonate synthase activity,
details
CFinderM001479GT31 GlycosylTransferases
CAMK_CDPK (from iTAK)
protein glycosylation,
details
CFinderM001481details
CFinderM001482Protein_processing_in_endoplasmic_reticulum
details
CFinderM001572Protein_processing_in_endoplasmic_reticulum
heat shock protein binding,
details
CFinderM001728NAK (from iTAK)
vacuolar_proton-transporting_V-type_ATPase,_V0_domain
proton-transporting V-type ATPase, V0 domain,
exocyst,
ATP hydrolysis coupled proton transport,
exocytosis,
Oxidative_phosphorylation
Phagosome
details
CFinderM001851katanin_complex
microtubule_severing
exocyst,
exocytosis,
microtubule binding,
triglyceride lipase activity,
details

4.Expression profilings


Show details about module gene expression profiling