CFinderM001434's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Oxidative_phosphorylation0.004413334KEGG
positive_regulation_of_autophagy0.006249902GO:0010508
phosphate-containing compound metabolic process,0.009368994GO:0006796
proton-transporting V-type ATPase, V0 domain,0.010299453GO:0033179
proton-transporting two-sector ATPase complex, proton-transporting domain,0.010299453GO:0033177
ATP hydrolysis coupled proton transport,0.021292184GO:0015991
glycolysis,0.032993145GO:0006096
fructose-bisphosphate aldolase activity,0.034014765GO:0004332
inorganic diphosphatase activity,0.036220097GO:0004427
hydrogen ion transmembrane transporter activity,0.036220097GO:0015078

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000068G1860SAP domain-containing proteinAT4G39680 (8.90E-92)
PH01000359G0820-- (-)
PH01000925G0530ATPase, F0/V0 complex, subunit C proteinAT1G19910 (3.10E-60)
PH01001064G0630pyrophosphorylase 4AT3G53620 (4.00E-105)
PH01001090G0480Aldolase superfamily proteinAT2G01140 (2.00E-180)
PH01002580G0020RNA recognition motif (RRM)-containing proteinAT3G23900 (1.30E-28)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000226DDT Transcription_Regulator(from iTAK)
glycolysis,
fructose-bisphosphate aldolase activity,
Methane_metabolism
Carbon_fixation_in_photosynthetic_organisms
Pentose_phosphate_pathway
Fructose_and_mannose_metabolism
Glycolysis_/_Gluconeogenesis
details
CFinderM000621glycolysis,
fructose-bisphosphate aldolase activity,
Pentose_phosphate_pathway
Fructose_and_mannose_metabolism
Carbon_fixation_in_photosynthetic_organisms
Glycolysis_/_Gluconeogenesis
Methane_metabolism
DDT Transcription_Regulator(from iTAK)
mitochondrial outer membrane,
regulation_of_anion_transport
anion transport,
voltage-gated anion channel activity,
catalytic activity,
pyruvate kinase activity,
potassium ion binding,
details
CFinderM000834Ubiquitin_mediated_proteolysis
details
CFinderM001407threonine-type endopeptidase activity,
endopeptidase activity,
proteolysis involved in cellular protein catabolic process,
proteasome core complex,
Proteasome
RLK-Pelle_LRR-XIV (from iTAK)
Protein_processing_in_endoplasmic_reticulum
proteasome core complex, alpha-subunit complex,
Protein_export
details
CFinderM001433positive_regulation_of_autophagy
rRNA_catabolic_process
proton-transporting V-type ATPase, V0 domain,
proton-transporting two-sector ATPase complex, proton-transporting domain,
ATP hydrolysis coupled proton transport,
ribonuclease III activity,
fructose-bisphosphate aldolase activity,
double-stranded RNA binding,
hydrogen ion transmembrane transporter activity,
glycolysis,
details
CFinderM001589PHD Transcription_Regulator(from iTAK)
fructose-bisphosphate aldolase activity,
glycolysis,
details
CFinderM001606LIM Transcription_Regulator(from iTAK)
mitochondrial proton-transporting ATP synthase complex, catalytic core F(1),
proton-transporting two-sector ATPase complex, catalytic domain,
proton-transporting ATP synthase complex, catalytic core F(1),
ATP biosynthetic process,
ATP metabolic process,
ATP_catabolic_process
actin cytoskeleton organization,
proton transport,
ATP synthesis coupled proton transport,
ATP hydrolysis coupled proton transport,
Phagosome
Oxidative_phosphorylation
details
CFinderM001766proton-transporting ATP synthase complex, catalytic core F(1),
mitochondrial proton-transporting ATP synthase complex, catalytic core F(1),
proton-transporting two-sector ATPase complex, catalytic domain,
mitochondrial outer membrane,
ATP metabolic process,
anion transport,
ATP biosynthetic process,
ATP_catabolic_process
regulation_of_anion_transport
proton transport,
ATP synthesis coupled proton transport,
fructose-bisphosphate aldolase activity,
voltage-gated anion channel activity,
ATP hydrolysis coupled proton transport,
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances,
hydrogen ion transporting ATP synthase activity, rotational mechanism,
details
CFinderM001776Protein_processing_in_endoplasmic_reticulum
U4/U6_x_U5_tri-snRNP_complex
intracellular protein transport,
GTP binding,
intracellular,
nuclear mRNA splicing, via spliceosome,
small GTPase mediated signal transduction,
details

4.Expression profilings