CFinderM001436's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
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1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
STE_STE20-Fray (from iTAK)0.009603221GFam
CAMTA Transcription_Regulator(from PlantTFDB)0.009603221GFam
Ubiquitin_mediated_proteolysis0.029054412KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000428G0370DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domainAT5G60410 (0.00E+00)
PH01000502G0010Tetratricopeptide repeat (TPR)-like superfamily proteinAT2G27610 (8.30E-50)
PH01000727G0100autophagy 2AT3G19190 (4.60E-42)
PH01000879G0230Protein kinase superfamily proteinAT5G14720 (0.00E+00)
PH01000938G0190Telomerase activating protein Est1AT5G19400 (7.00E-156)
PH01001178G0490plant U-box 49AT5G67530 (0.00E+00)
PH01001196G0070autophagy 9 (APG9)AT2G31260 (0.00E+00)
PH01001502G0450ABC transporter of the mitochondrion 3AT5G58270 (0.00E+00)
PH01002143G0030calmodulin binding;transcription regulatorsAT4G16150 (0.00E+00)
PH01002178G0190fatty acyl-ACP thioesterases BAT1G08510 (7.00E-136)
PH01002248G0180methyl-CPG-binding domain 4AT3G63030 (1.10E-36)
PH01002722G00902-oxoacid dehydrogenases acyltransferase family proteinAT3G25860 (2.20E-97)
PH01002801G0100DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domainAT5G60410 (9.00E-123)
PH01004030G0100initiator tRNA phosphoribosyl transferase family proteinAT2G40570 (1.00E-162)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000290autophagy,
Valine,_leucine_and_isoleucine_degradation
Endocytosis
details
CFinderM000442GATA Transcription_Regulator(from PlantTFDB)
C2C2-GATA Transcription_Regulator(from iTAK)
RLK-Pelle_LRR-VII-1 (from iTAK)
positive_regulation_of_transcription,_DNA-templated
details
CFinderM000688GT64 GlycosylTransferases
Alanine,_aspartate_and_glutamate_metabolism
intrinsic to endoplasmic reticulum membrane,
Nicotinate_and_nicotinamide_metabolism
Terpenoid_backbone_biosynthesis
regulation of ARF GTPase activity,
isoprenoid biosynthetic process,
details
CFinderM000732SNF2 Transcription_Regulator(from iTAK)
transferase activity, transferring pentosyl groups,
mRNA_surveillance_pathway
details
CFinderM000810CAMTA Transcription_Regulator(from PlantTFDB)
glycerol-3-phosphate dehydrogenase complex,
Valine,_leucine_and_isoleucine_degradation
details
CFinderM000882GH35 Glycoside_Hydrolases
transferase activity, transferring pentosyl groups,
details
CFinderM000977mRNA_surveillance_pathway
CAMTA Transcription_Regulator(from PlantTFDB)
Ubiquitin_mediated_proteolysis
defense response,
details
CFinderM001010RLK-Pelle_PERK-2 (from iTAK)
ethylene mediated signaling pathway,
endoplasmic reticulum membrane,
Plant_hormone_signal_transduction
protein histidine kinase activity,
Others Transcription_Regulator(from iTAK)
two-component sensor activity,
protein tyrosine kinase activity,
two-component signal transduction system (phosphorelay),
EIL Transcription_Regulator(from PlantTFDB)
two-component response regulator activity,
signal transducer activity,
sulfate assimilation,
details
CFinderM001304nucleoside-triphosphatase activity,
ATPase activity, coupled to transmembrane movement of substances,
GT47 GlycosylTransferases
RLK-Pelle_CR4L (from iTAK)
ABC_transporters
ATPase activity,
ATP binding,
nucleotide binding,
SNF2 Transcription_Regulator(from iTAK)
details
CFinderM001378IMP biosynthetic process,
purine ribonucleoside monophosphate biosynthetic process,
thiolester_hydrolase_activity
AMP deaminase activity,
deaminase activity,
regulation of ARF GTPase activity,
ARF GTPase activator activity,
Fatty_acid_biosynthesis
Purine_metabolism
fatty acid biosynthetic process,
zinc ion binding,
details
CFinderM001389outer membrane-bounded periplasmic space,
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
Protein_processing_in_endoplasmic_reticulum
details
CFinderM001432RLK-Pelle_CR4L (from iTAK)
ubiquitin ligase complex,
Ubiquitin_mediated_proteolysis
regulation of ARF GTPase activity,
details
CFinderM001457mRNA_surveillance_pathway
Diterpenoid_biosynthesis
CAMTA Transcription_Regulator(from PlantTFDB)
protein binding,
mechanically-gated_ion_channel_activity
details
CFinderM001458mRNA_surveillance_pathway
AGC_RSK-2 (from iTAK)
SBP Transcription_Regulator(from PlantTFDB)
cell death,
details
CFinderM001499Glutathione_metabolism
metallopeptidase activity,
ionotropic glutamate receptor activity,
extracellular-glutamate-gated ion channel activity,
outer membrane-bounded periplasmic space,
details
CFinderM001574SBP Transcription_Regulator(from PlantTFDB)
mRNA_surveillance_pathway
bZIP Transcription_Regulator(from PlantTFDB)
details
CFinderM001611CAMTA Transcription_Regulator(from PlantTFDB)
ABC_transporters
Phosphatidylinositol_signaling_system
Inositol_phosphate_metabolism
Phagosome
details
CFinderM001628GH19 Glycoside_Hydrolases
transferase activity, transferring pentosyl groups,
chitinase activity,
ER to Golgi vesicle-mediated transport,
chitin catabolic process,
cell wall macromolecule catabolic process,
details
CFinderM001729mRNA_surveillance_pathway
CAMTA Transcription_Regulator(from PlantTFDB)
protein binding,
transferase activity, transferring acyl groups,
details
CFinderM001785transferase activity, transferring pentosyl groups,
Nicotinate_and_nicotinamide_metabolism
Diterpenoid_biosynthesis
details
CFinderM001826regulation of ARF GTPase activity,
details
CFinderM001870Basal_transcription_factors
SNF2 Transcription_Regulator(from iTAK)
transferase activity, transferring pentosyl groups,
details

4.Expression profilings


Show details about module gene expression profiling