|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | methyltransferase activity, | 2.39E-05 | GO:0008168 | | DNA metabolic process, | 0.015159991 | GO:0006259 | | nuclease activity, | 0.015605232 | GO:0004518 | | MYB-related Transcription_Regulator(from iTAK) | 0.023755064 | GFam | | MYB_related Transcription_Regulator(from PlantTFDB) | 0.023755064 | GFam | | cell redox homeostasis, | 0.035928121 | GO:0045454 | | Nucleotide_excision_repair | 0.036388081 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000111G0760 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | AT5G64030 (0.00E+00) | | PH01000141G0030 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | AT5G64030 (0.00E+00) | | PH01000223G0830 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | AT2G39750 (0.00E+00) | | PH01001174G0310 | PDI-like 1-5 | AT1G52260 (2.00E-144) | | PH01001672G0380 | TRF-like 7 | AT1G06910 (4.20E-11) | | PH01006328G0050 | Restriction endonuclease, type II-like superfamily protein | AT5G41150 (0.00E+00) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM001368 | Protein_processing_in_endoplasmic_reticulum
cell redox homeostasis,
endoplasmic reticulum,
| details | | CFinderM001491 | 3,4-dihydroxy-2-butanone-4-phosphate synthase activity,
glucose-6-phosphate isomerase activity,
sterol_24-C-methyltransferase_activity
GTP cyclohydrolase II activity,
riboflavin biosynthetic process,
steroid biosynthetic process,
gluconeogenesis,
isoprenoid biosynthetic process,
| details | | CFinderM001504 | Amino_sugar_and_nucleotide_sugar_metabolism
GT8 GlycosylTransferases
DNA metabolic process,
cellular metabolic process,
Nucleotide_excision_repair
Starch_and_sucrose_metabolism
| details | | CFinderM001604 | GT31 GlycosylTransferases
Nucleotide_excision_repair
guanyl nucleotide binding,
G-protein_beta/gamma-subunit_complex_binding
DNA metabolic process,
G-protein coupled receptor signaling pathway,
nuclease activity,
endoplasmic reticulum,
| details | | CFinderM001768 | regulation of Rab GTPase activity,
Rab GTPase activator activity,
intracellular,
Nucleotide_excision_repair
G-protein coupled receptor signaling pathway,
DNA metabolic process,
guanyl nucleotide binding,
G-protein_beta/gamma-subunit_complex_binding
nuclease activity,
| details | | CFinderM001774 | regulation of Rab GTPase activity,
Rab GTPase activator activity,
intracellular,
DNA metabolic process,
isoprenoid biosynthetic process,
nuclease activity,
Nucleotide_excision_repair
Terpenoid_backbone_biosynthesis
| details | | CFinderM001872 | 3,4-dihydroxy-2-butanone-4-phosphate synthase activity,
GTP cyclohydrolase II activity,
Riboflavin_metabolism
riboflavin biosynthetic process,
isoprenoid biosynthetic process,
nucleic acid binding,
Terpenoid_backbone_biosynthesis
| details |
4.Expression profilings |
