|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | chromosome, centromeric region, | 0.005060443 | GO:0000775 | | mitosis, | 0.010113771 | GO:0007067 | | helicase activity, | 0.014922175 | GO:0004386 | | RNA_degradation | 0.020270217 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000005G2160 | centromere/kinetochore protein, putative (ZW10) | AT2G32900 (6.00E-156) | | PH01000036G1850 | phloem protein 2-B11 | AT1G80110 (1.90E-35) | | PH01000107G0110 | dicer-like 1 | AT1G01040 (8.00E-141) | | PH01000123G0740 | RNA helicase, ATP-dependent, SK12/DOB1 protein | AT2G06990 (0.00E+00) | | PH01000150G0990 | A20/AN1-like zinc finger family protein | AT3G12630 (7.90E-36) | | PH01000803G0160 | Insulinase (Peptidase family M16) protein | AT5G56730 (0.00E+00) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000410 | Ribosome_biogenesis_in_eukaryotes
IWS1 Transcription_Regulator(from iTAK)
tyrosine biosynthetic process,
ribosomal_large_subunit_biogenesis
ribosomal_large_subunit_export_from_nucleus
small-subunit processome,
cytoplasm,
| details | | CFinderM000889 | mRNA_surveillance_pathway
RNA_degradation
| details | | CFinderM001218 | | details | | CFinderM001393 | nuclear origin of replication recognition complex,
response to desiccation,
Terpenoid_backbone_biosynthesis
isoprenoid biosynthetic process,
protein dephosphorylation,
DNA_replication
| details | | CFinderM001416 | nuclear origin of replication recognition complex,
response to desiccation,
DNA binding,
Dof Transcription_Regulator(from PlantTFDB)
C2C2-Dof Transcription_Regulator(from iTAK)
DNA_replication
| details | | CFinderM001667 | spliceosomal_tri-snRNP_complex_assembly
chromosome, centromeric region,
U4/U6_x_U5_tri-snRNP_complex
chromosome,
DNA topological change,
mitosis,
nuclear mRNA splicing, via spliceosome,
| details |
4.Expression profilings |
