|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000174G1170 | evolutionarily conserved C-terminal region 4 | AT1G55500 (7.40E-95) | | PH01000181G0700 | - | AT1G56423 (2.00E-80) | | PH01000181G1330 | ubiquitin-conjugating enzyme 32 | AT3G17000 (7.90E-92) | | PH01000708G0600 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT1G60770 (3.00E-170) | | PH01001026G0710 | TCP-1/cpn60 chaperonin family protein | AT3G11830 (0.00E+00) | | PH01001203G0410 | cationic amino acid transporter 3 | AT5G36940 (4.00E-144) | | PH01001405G0230 | evolutionarily conserved C-terminal region 4 | AT1G55500 (8.00E-101) | | PH01004791G0080 | Transducin/WD40 repeat-like superfamily protein | AT1G78070 (6.00E-118) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000144 | protein binding,
acid-amino acid ligase activity,
| details | | CFinderM000587 | protein binding,
acid-amino acid ligase activity,
| details | | CFinderM000940 | nucleic acid binding,
Ribosome_biogenesis_in_eukaryotes
| details | | CFinderM001079 | SOS_response
DNA metabolic process,
cellular protein metabolic process,
| details | | CFinderM001110 | Ubiquitin_mediated_proteolysis
acid-amino acid ligase activity,
protein neddylation,
cellular protein modification process,
small protein activating enzyme activity,
| details | | CFinderM001131 | | details | | CFinderM001414 | PHD Transcription_Regulator(from iTAK)
| details | | CFinderM001415 | PHD Transcription_Regulator(from iTAK)
| details | | CFinderM001435 | Jumonji Transcription_Regulator(from iTAK)
PHD Transcription_Regulator(from iTAK)
RNA_transport
| details | | CFinderM001452 | 'de novo' IMP biosynthetic process,
5-(carboxyamino)imidazole_ribonucleotide_mutase_activity
| details | | CFinderM001510 | Ribosome_biogenesis_in_eukaryotes
RNA processing,
acid-amino acid ligase activity,
| details | | CFinderM001718 | phosphoribosyl-AMP cyclohydrolase activity,
histidine biosynthetic process,
RNA modification,
pseudouridine synthesis,
nuclear pore,
| details |
4.Expression profilings |
