CFinderM001536's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
carbohydrate phosphorylation,0.007290983GO:0046835
galactose metabolic process,0.015474464GO:0006012
CAMK_CDPK (from iTAK)0.02541445GFam
Others Transcription_Regulator(from iTAK)0.02541445GFam
galactokinase activity,0.025626068GO:0004335
Galactose_metabolism0.032017872KEGG
Amino_sugar_and_nucleotide_sugar_metabolism0.033159637KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000000G5850calcium-dependent protein kinase 29AT1G76040 (1.00E-144)
PH01000040G1260Mevalonate/galactokinase family proteinAT3G06580 (0.00E+00)
PH01000051G1290-- (-)
PH01000154G1480DA1-related protein 2AT2G39830 (2.00E-144)
PH01000625G0190-- (-)
PH01000694G0140-AT5G49050 (2.60E-14)
PH01001398G0110F-box family proteinAT5G07610 (3.90E-18)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000133C2H2 Transcription_Regulator(from PlantTFDB)
RWP-RK Transcription_Regulator(from iTAK)
Nin-like Transcription_Regulator(from PlantTFDB)
carbohydrate phosphorylation,
details
CFinderM000319nucleoside_diphosphate_phosphorylation
carbohydrate phosphorylation,
histone_H4_acetylation
UTP biosynthetic process,
CTP biosynthetic process,
histone_H2A_acetylation
GTP biosynthetic process,
aromatic amino acid family metabolic process,
chromatin remodeling,
details
CFinderM000475TKL-Pl-6 (from iTAK)
carbohydrate phosphorylation,
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
galactokinase activity,
diphosphate-fructose-6-phosphate 1-phosphotransferase activity,
fructose_6-phosphate_metabolic_process
galactose metabolic process,
Fructose_and_mannose_metabolism
Galactose_metabolism
ATP binding,
6-phosphofructokinase activity,
kinase activity,
details
CFinderM000606histone_H2A_acetylation
CTP biosynthetic process,
histone_H4_acetylation
protein neddylation,
nucleoside_diphosphate_phosphorylation
UTP biosynthetic process,
GTP biosynthetic process,
carbohydrate phosphorylation,
chromatin remodeling,
details
CFinderM000824cytoplasm,
aromatic amino acid family metabolic process,
carbohydrate phosphorylation,
galactose metabolic process,
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,
galactokinase activity,
iron ion binding,
heme binding,
electron carrier activity,
kinase activity,
Galactose_metabolism
Amino_sugar_and_nucleotide_sugar_metabolism
details
CFinderM000915UTP biosynthetic process,
nucleoside_diphosphate_phosphorylation
CTP biosynthetic process,
GTP biosynthetic process,
regulation of actin filament polymerization,
nucleoside diphosphate kinase activity,
cytoskeleton,
Pyrimidine_metabolism
Purine_metabolism
details
CFinderM000963RLK-Pelle_LRR-XI-1 (from iTAK)
Others Transcription_Regulator(from iTAK)
zinc ion binding,
details
CFinderM001254GARP-G2-like Transcription_Regulator(from iTAK)
G2-like Transcription_Regulator(from PlantTFDB)
Others Transcription_Regulator(from iTAK)
bZIP Transcription_Regulator(from PlantTFDB)
details
CFinderM001587Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
nucleoside_diphosphate_phosphorylation
branched chain family amino acid metabolic process,
CTP biosynthetic process,
GTP biosynthetic process,
UTP biosynthetic process,
nucleoside diphosphate kinase activity,
branched-chain-amino-acid transaminase activity,
Pantothenate_and_CoA_biosynthesis
details
CFinderM001692TKL-Pl-4 (from iTAK)
carbohydrate phosphorylation,
Ribosome
translation,
galactose metabolic process,
intracellular,
galactokinase activity,
Galactose_metabolism
Amino_sugar_and_nucleotide_sugar_metabolism
structural constituent of ribosome,
kinase activity,
details

4.Expression profilings