CFinderM001553's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
seryl-tRNA aminoacylation,0.003374156GO:0006434
serine-tRNA ligase activity,0.020413645GO:0004828
Regulation_of_autophagy0.026247611KEGG
tRNA aminoacylation for protein translation,0.02886672GO:0006418
ribonuclease activity,0.033134872GO:0004540
Aminoacyl-tRNA_biosynthesis0.045308958KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000026G1530MAK10 homologueAT2G11000 (1.00E-115)
PH01000321G0060UBX domain-containing proteinAT4G10790 (6.00E-103)
PH01000370G1160ribonuclease II family proteinAT2G17510 (0.00E+00)
PH01000718G0270seryl-tRNA synthetase / serine--tRNA ligaseAT5G27470 (9.00E-178)
PH01001331G0320nucleotide binding;protein bindingAT4G28450 (0.00E+00)
PH01002065G0310-- (-)
PH01002206G0060Ubiquitin-like superfamily proteinAT1G62040 (1.10E-55)
PH01002809G0270Transducin/WD40 repeat-like superfamily proteinAT3G62770 (7.00E-139)
PH01003839G0010Tetratricopeptide repeat (TPR)-like superfamily proteinAT5G01110 (1.20E-77)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000231NAD biosynthetic process,
nucleotide-excision repair,
protein folding,
histone_lysine_methylation
details
CFinderM000658NAC Transcription_Regulator(from PlantTFDB)
heme oxidation,
heme oxygenase (decyclizing) activity,
hydrogen-translocating pyrophosphatase activity,
proton transport,
details
CFinderM000697Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
details
CFinderM000851CMGC_GSK (from iTAK)
regulation_of_DNA-templated_transcription,_elongation
details
CFinderM000905Sulfur_relay_system
details
CFinderM001054seryl-tRNA aminoacylation,
electron transport chain,
bZIP Transcription_Regulator(from PlantTFDB)
serine-tRNA ligase activity,
RNA metabolic process,
details
CFinderM001252SET Transcription_Regulator(from iTAK)
eukaryotic translation initiation factor 3 complex,
RNA_transport
protein binding,
details
CFinderM001298HB-other Transcription_Regulator(from PlantTFDB)
details
CFinderM001552HB-other Transcription_Regulator(from PlantTFDB)
Protein_processing_in_endoplasmic_reticulum
details
CFinderM001727protein binding,
Protein_processing_in_endoplasmic_reticulum
details
CFinderM001896seryl-tRNA aminoacylation,
serine-tRNA ligase activity,
5S rRNA binding,
Aminoacyl-tRNA_biosynthesis
tRNA aminoacylation for protein translation,
details

4.Expression profilings


Show details about module gene expression profiling