|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | AGC_NDR (from iTAK) | 0.001499508 | GFam | | purine ribonucleoside monophosphate biosynthetic process, | 0.011021382 | GO:0009168 | | IMP biosynthetic process, | 0.011021382 | GO:0006188 | | ubiquitin ligase complex, | 0.014910961 | GO:0000151 | | G-protein coupled receptor signaling pathway, | 0.017435527 | GO:0007186 | | AMP deaminase activity, | 0.020989636 | GO:0003876 | | guanyl nucleotide binding, | 0.020989636 | GO:0019001 | | G-protein_beta/gamma-subunit_complex_binding | 0.020989636 | GO:0031683 | | deaminase activity, | 0.020989636 | GO:0019239 | | Spliceosome | 0.035474674 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000423G0650 | Protein kinase family protein | AT1G30640 (3.00E-122) | | PH01000574G0640 | ARM repeat superfamily protein | AT1G76390 (0.00E+00) | | PH01001221G0180 | extra-large GTP-binding protein 3 | AT1G31930 (0) | | PH01001658G0300 | AMP deaminase, putative / myoadenylate deaminase, putative | AT2G38280 (0.00E+00) | | PH01002305G0140 | ortholog of human splicing factor SC35 | AT5G64200 (1.60E-48) | | PH01173539G0010 | cyclic nucleotide gated channel 1 | AT5G53130 (2.70E-80) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000315 | AGC_NDR (from iTAK)
Jumonji Transcription_Regulator(from iTAK)
phagocytosis,
phosphorylation,
cytoskeleton,
Spliceosome
| details | | CFinderM000316 | RLK-Pelle_RLCK-IV (from iTAK)
AGC_NDR (from iTAK)
Jumonji Transcription_Regulator(from iTAK)
signal transducer activity,
| details | | CFinderM000743 | Spliceosome
protein catabolic process,
| details | | CFinderM000746 | CMGC_DYRK-YAK (from iTAK)
TKL-Pl-6 (from iTAK)
| details | | CFinderM001124 | AGC_NDR (from iTAK)
Spliceosome
| details | | CFinderM001403 | CMGC_DYRK-PRP4 (from iTAK)
integral to membrane,
| details | | CFinderM001478 | GH47 Glycoside_Hydrolases
purine ribonucleoside monophosphate biosynthetic process,
IMP biosynthetic process,
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity,
deaminase activity,
AMP deaminase activity,
potassium_ion_transmembrane_transport
membrane,
potassium ion transmembrane transporter activity,
| details | | CFinderM001620 | GT37 GlycosylTransferases
cell wall biogenesis,
purine ribonucleoside monophosphate biosynthetic process,
IMP biosynthetic process,
AMP deaminase activity,
deaminase activity,
galactoside 2-alpha-L-fucosyltransferase activity,
N-acetyltransferase_activity
| details | | CFinderM001814 | Spliceosome
nucleotide binding,
snRNA_binding
nuclear mRNA splicing, via spliceosome,
phospholipid transport,
phospholipid-translocating ATPase activity,
cation transport,
| details | | CFinderM001859 | protein catabolic process,
| details |
4.Expression profilings |
