CFinderM001623's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Ribosome_biogenesis_in_eukaryotes0.000121777KEGG
ribosome biogenesis,0.005426803GO:0042254
GTP binding,0.010336069GO:0005525

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000045G1370-AT5G45410 (4.20E-89)
PH01000321G0400XB3 ortholog 3 in Arabidopsis thalianaAT5G07270 (6.00E-118)
PH01000383G0090P-loop containing nucleoside triphosphate hydrolases superfamily proteinAT1G80770 (3.00E-125)
PH01000513G0710LisH/CRA/RING-U-box domains-containing proteinAT4G37880 (2.00E-114)
PH01001372G0290P-loop containing nucleoside triphosphate hydrolases superfamily proteinAT1G06720 (1.00E-175)
PH01002461G0230RING/U-box superfamily proteinAT3G05545 (1.30E-35)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000658NAC Transcription_Regulator(from PlantTFDB)
heme oxidation,
heme oxygenase (decyclizing) activity,
hydrogen-translocating pyrophosphatase activity,
proton transport,
details
CFinderM001298HB-other Transcription_Regulator(from PlantTFDB)
details
CFinderM001429negative_regulation_of_transcription,_DNA-templated
FMN binding,
details
CFinderM001585bZIP Transcription_Regulator(from PlantTFDB)
details
CFinderM001727protein binding,
Protein_processing_in_endoplasmic_reticulum
details
CFinderM001730Alanine,_aspartate_and_glutamate_metabolism
TKL-Pl-2 (from iTAK)
carbamoyl_phosphate_biosynthetic_process
glutamine_catabolic_process
clathrin_coat
clathrin_coat_assembly
Pyrimidine_metabolism
bZIP Transcription_Regulator(from PlantTFDB)
details
CFinderM001780S-adenosylmethionine_biosynthetic_process
Cysteine_and_methionine_metabolism
bZIP Transcription_Regulator(from PlantTFDB)
methionine adenosyltransferase activity,
details

4.Expression profilings