CFinderM001628's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
GH19 Glycoside_Hydrolases0.001312131GFam
transferase activity, transferring pentosyl groups,0.009112874GO:0016763
chitinase activity,0.019108347GO:0004568
ER to Golgi vesicle-mediated transport,0.026566555GO:0006888
chitin catabolic process,0.026566555GO:0006032
cell wall macromolecule catabolic process,0.026566555GO:0016998

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000511G0330SNARE-like superfamily proteinAT2G20930 (1.30E-57)
PH01000623G0070Chitinase family proteinAT1G05850 (9.00E-121)
PH01000654G0610plasmodesmata callose-binding protein 3AT1G18650 (3.60E-26)
PH01000767G0710FASCICLIN-like arabinogalactan protein 17 precursorAT5G06390 (3.30E-34)
PH01002151G0170RING/U-box superfamily proteinAT3G03550 (6.80E-55)
PH01002426G0280-AT4G35320 (3.80E-20)
PH01004030G0100initiator tRNA phosphoribosyl transferase family proteinAT2G40570 (1.00E-162)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000732SNF2 Transcription_Regulator(from iTAK)
transferase activity, transferring pentosyl groups,
mRNA_surveillance_pathway
details
CFinderM000882GH35 Glycoside_Hydrolases
transferase activity, transferring pentosyl groups,
details
CFinderM001067DNA recombination,
RNA_degradation
cellular metabolic process,
details
CFinderM001339chitin catabolic process,
chitinase activity,
cell wall macromolecule catabolic process,
GH19 Glycoside_Hydrolases
details
CFinderM001436STE_STE20-Fray (from iTAK)
CAMTA Transcription_Regulator(from PlantTFDB)
Ubiquitin_mediated_proteolysis
details
CFinderM001700leucine biosynthetic process,
tRNA methylation,
tRNA (guanine-N1-)-methyltransferase activity,
2-isopropylmalate synthase activity,
details
CFinderM001778GT16 GlycosylTransferases
oligosaccharide biosynthetic process,
Golgi stack,
7-methylguanosine mRNA capping,
mRNA processing,
alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity,
mRNA guanylyltransferase activity,
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
binding,
details
CFinderM001785transferase activity, transferring pentosyl groups,
Nicotinate_and_nicotinamide_metabolism
Diterpenoid_biosynthesis
details
CFinderM001870Basal_transcription_factors
SNF2 Transcription_Regulator(from iTAK)
transferase activity, transferring pentosyl groups,
details

4.Expression profilings