|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | Citrate_cycle_(TCA_cycle) | 0.000247145 | KEGG | | Pyruvate_metabolism | 0.000265906 | KEGG | | Glycolysis_/_Gluconeogenesis | 0.000342896 | KEGG | | transferase activity, transferring acyl groups, | 0.000459163 | GO:0016746 | | pyruvate dehydrogenase complex, | 0.001125158 | GO:0045254 | | dihydrolipoyllysine-residue acetyltransferase activity, | 0.002140926 | GO:0004742 | | metabolic process, | 0.002577883 | GO:0008152 | | pyruvate metabolic process, | 0.002577883 | GO:0006090 | | small-subunit processome, | 0.003372838 | GO:0032040 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000019G0830 | Dihydrolipoamide acetyltransferase, long form protein | AT3G13930 (3.00E-176) | | PH01000345G0210 | ATP citrate lyase (ACL) family protein | AT2G20420 (1.50E-98) | | PH01000360G0570 | alanine aminotransferase 2 | AT1G72330 (2.00E-101) | | PH01001513G0040 | Dihydrolipoamide acetyltransferase, long form protein | AT1G54220 (1.00E-105) | | PH01001726G0180 | AAA-type ATPase family protein | AT4G04910 (1.00E-163) | | PH01003273G0050 | - | AT5G55610 (2.00E-48) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000305 | small-subunit processome,
regulation of ARF GTPase activity,
GT2 GlycosylTransferases
Starch_and_sucrose_metabolism
Endocytosis
| details | | CFinderM000421 | pyruvate dehydrogenase complex,
cellular modified amino acid biosynthetic process,
glutathione biosynthetic process,
pyruvate metabolic process,
dihydrolipoyllysine-residue acetyltransferase activity,
glutamate-cysteine ligase activity,
glycogen_phosphorylase_activity
Citrate_cycle_(TCA_cycle)
Glycolysis_/_Gluconeogenesis
Pyruvate_metabolism
Glutathione_metabolism
transferase activity, transferring acyl groups,
metabolic process,
| details | | CFinderM000962 | 6-phosphofructokinase complex,
6-phosphofructokinase activity,
glycolysis,
translation_initiation_factor_binding
diphosphate-fructose-6-phosphate 1-phosphotransferase activity,
eukaryotic translation initiation factor 3 complex,
fructose_6-phosphate_metabolic_process
translational initiation,
ATP synthesis coupled proton transport,
hydrogen ion transporting ATP synthase activity, rotational mechanism,
Oxidative_phosphorylation
RNA_transport
| details | | CFinderM001294 | small-subunit processome,
DNA integration,
ubiquitin-dependent protein catabolic process,
| details | | CFinderM001312 | metalloendopeptidase activity,
Riboflavin_metabolism
6-phosphofructokinase complex,
GTP cyclohydrolase II activity,
catalytic activity,
3,4-dihydroxy-2-butanone-4-phosphate synthase activity,
proteolysis,
riboflavin biosynthetic process,
metallopeptidase activity,
6-phosphofructokinase activity,
glycolysis,
| details | | CFinderM001422 | Glycine,_serine_and_threonine_metabolism
small-subunit processome,
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o),
clathrin adaptor complex,
| details | | CFinderM001608 | pyruvate dehydrogenase complex,
dihydrolipoyllysine-residue acetyltransferase activity,
pyruvate metabolic process,
protein processing,
small-subunit processome,
integral to membrane,
transferase activity, transferring acyl groups,
mRNA_surveillance_pathway
Pyruvate_metabolism
Glycolysis_/_Gluconeogenesis
Citrate_cycle_(TCA_cycle)
| details | | CFinderM001686 | Oxidative_phosphorylation
GTnc GlycosylTransferases
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o),
small-subunit processome,
proton-transporting V-type ATPase, V1 domain,
proton-transporting two-sector ATPase complex, catalytic domain,
ATP synthesis coupled proton transport,
ATP metabolic process,
proton transport,
ATP hydrolysis coupled proton transport,
Phagosome
| details |
4.Expression profilings |
