1.Module annotation (GSEA enrichment result) Function Annotation | FDR | Gene Ontolog | Ribosome | 0.010306557 | KEGG | translation, | 0.011563581 | GO:0006412 | Ribosome | 0.013257322 | KEGG | intracellular, | 0.019877944 | GO:0005622 | C3H Transcription_Regulator(from PlantTFDB) | 0.026795391 | GFam |
2.Module member annotation Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | PH01000008G2090 | 2-oxoacid dehydrogenases acyltransferase family protein | AT3G25860 (8.50E-78) | PH01000087G1380 | CCCH-type zinc finger family protein | AT2G02160 (5.20E-34) | PH01000749G0490 | phosphoinositide binding | AT1G61690 (7.10E-77) | PH01000948G0300 | RING/U-box superfamily protein | AT4G34100 (0.00E+00) | PH01001720G0330 | NAD(P)-binding Rossmann-fold superfamily protein | AT2G05990 (2.60E-69) | PH01001897G0050 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | AT1G36240 (2.40E-48) | PH01003328G0010 | ribosomal protein L23AA | AT2G39460 (7.40E-55) | PH01004872G0080 | Pre-mRNA splicing Prp18-interacting factor | AT1G65660 (0.00E+00) |
3.Direct connection functional modules Module ID | Function Annotation | Overlap condition | CFinderM000593 | nicotinate nucleotide salvage, diphosphomevalonate decarboxylase activity, nicotinate phosphoribosyltransferase activity, nicotinate-nucleotide diphosphorylase (carboxylating) activity, NAD biosynthetic process, Nicotinate_and_nicotinamide_metabolism isoprenoid biosynthetic process, Terpenoid_backbone_biosynthesis large ribosomal subunit,
| details | CFinderM000599 | mRNA_cis_splicing,_via_spliceosome nuclear_cap_binding_complex RNA_cap_binding hydro-lyase activity, fatty acid biosynthetic process, Biotin_metabolism Fatty_acid_biosynthesis
| details | CFinderM001065 | threonine-type endopeptidase activity, endopeptidase activity, proteasome core complex, proteolysis involved in cellular protein catabolic process, Proteasome thiol oxidase activity, Protein_processing_in_endoplasmic_reticulum proteasome core complex, alpha-subunit complex, Retinol_metabolism
| details | CFinderM001275 | HB-other Transcription_Regulator(from PlantTFDB) mRNA_surveillance_pathway
| details | CFinderM001468 | IWS1 Transcription_Regulator(from iTAK) Biotin_metabolism Fatty_acid_biosynthesis
| details | CFinderM001494 | GRAS Transcription_Regulator(from PlantTFDB) protein catabolic process,
| details | CFinderM001570 | cis-Golgi network, transcription factor TFIID complex, Basal_transcription_factors
| details | CFinderM001823 | large ribosomal subunit,
| details | CFinderM001837 | Ribosome ribosome biogenesis, ribonucleoprotein complex, large ribosomal subunit,
| details | CFinderM001840 | transcription factor TFIIF complex, STE_STE11 (from iTAK) diphosphomevalonate decarboxylase activity, ATP binding, histone deacetylase activity, histone deacetylation, transcription initiation from RNA polymerase II promoter, Basal_transcription_factors Terpenoid_backbone_biosynthesis protein catabolic process, isoprenoid biosynthetic process, Endocytosis
| details | CFinderM001866 | sterol metabolic process, Steroid_biosynthesis cholestenol delta-isomerase activity, protein catabolic process, MYB_related Transcription_Regulator(from PlantTFDB) C3H Transcription_Regulator(from PlantTFDB) MYB-related Transcription_Regulator(from iTAK)
| details |
4.Expression profilings |