CFinderM001647's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
phenylalanyl-tRNA aminoacylation,4.68E-06GO:0006432
phenylalanine-tRNA ligase activity,1.36E-05GO:0004826
tRNA binding,5.31E-05GO:0000049
tRNA aminoacylation,7.59E-05GO:0043039
Aminoacyl-tRNA_biosynthesis0.000397042KEGG
aminoacyl-tRNA ligase activity,0.001284936GO:0004812
fumarate metabolic process,0.002497396GO:0006106
nucleotide binding,0.003072609GO:0000166
magnesium ion binding,0.003072609GO:0000287
tricarboxylic acid cycle enzyme complex,0.003609375GO:0045239
fumarate hydratase activity,0.00363329GO:0004333
cytoplasm,0.00600886GO:0005737
mitochondrial outer membrane,0.00600886GO:0005741
RNA binding,0.014542956GO:0003723
tricarboxylic acid cycle,0.016198103GO:0006099
Carbon_fixation_pathways_in_prokaryotes0.016804313KEGG
Citrate_cycle_(TCA_cycle)0.021950026KEGG
lyase activity,0.028084171GO:0016829

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000006G2790tRNA synthetase beta subunit family proteinAT1G72550 (0.00E+00)
PH01000047G0750dgd1 suppressor 1AT5G12290 (8.20E-84)
PH01000416G0630fumarase 1AT2G47510 (4.00E-141)
PH01000430G0870translocase of the outer mitochondrial membrane 40AT3G20000 (1.00E-109)
PH01000458G0680-AT3G44150 (1.00E-78)
PH01002063G0150tRNA synthetase beta subunit family proteinAT1G72550 (6.00E-131)
PH01002557G0220oligouridylate binding protein 1BAT1G17370 (2.00E-158)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000139metabolic process,
transferase activity, transferring hexosyl groups,
cysteine metabolic process,
phenylalanyl-tRNA aminoacylation,
cysteine desulfurase activity,
phenylalanine-tRNA ligase activity,
details
CFinderM000365microtubule-based movement,
microtubule associated complex,
microtubule motor activity,
regulation of Rab GTPase activity,
Rab GTPase activator activity,
details
CFinderM000835phenylalanyl-tRNA aminoacylation,
aminoacyl-tRNA ligase activity,
phenylalanine-tRNA ligase activity,
tRNA binding,
tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
nucleotide binding,
magnesium ion binding,
cytoplasm,
GeBP Transcription_Regulator(from PlantTFDB)
RNA binding,
tRNA aminoacylation for protein translation,
ATP binding,
details
CFinderM000848GT66 GlycosylTransferases
phenylalanyl-tRNA aminoacylation,
tRNA aminoacylation,
oligosaccharyl transferase activity,
phenylalanine-tRNA ligase activity,
tRNA binding,
protein glycosylation,
Various_types_of_N-glycan_biosynthesis
Aminoacyl-tRNA_biosynthesis
N-Glycan_biosynthesis
details
CFinderM000941defense_response_signaling_pathway,_resistance_gene-dependent
phenylalanyl-tRNA aminoacylation,
defense response to bacterium,
tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
phenylalanine-tRNA ligase activity,
tRNA binding,
details
CFinderM001318RLK-Pelle_RLCK-XI (from iTAK)
GT4 GlycosylTransferases
Glycosylphosphatidylinositol(GPI)-anchor_biosynthesis
Rab GDP-dissociation inhibitor activity,
GPI anchor biosynthetic process,
details
CFinderM001321GT66 GlycosylTransferases
peroxisome_fission
phenylalanyl-tRNA aminoacylation,
integral_component_of_peroxisomal_membrane
SAGA-type_complex
tRNA aminoacylation,
oligosaccharyl transferase activity,
phenylalanine-tRNA ligase activity,
details
CFinderM001673HAUS_complex
RLK-Pelle_LRR-V (from iTAK)
STE_STE11 (from iTAK)
spindle_assembly
zinc_ion_transmembrane_transport
details
CFinderM001684heme_a_biosynthetic_process
peroxisomal membrane,
mitochondrial outer membrane,
protein_import_into_peroxisome_matrix
negative_regulation_of_transcription,_DNA-templated
transcription_corepressor_activity
details
CFinderM001696phenylalanyl-tRNA aminoacylation,
microtubule,
mitochondrial outer membrane,
protein complex,
Fatty_acid_metabolism
Peroxisome
Aminoacyl-tRNA_biosynthesis
phenylalanine-tRNA ligase activity,
tRNA aminoacylation,
protein polymerization,
microtubule-based process,
tRNA binding,
details
CFinderM001759Citrate_cycle_(TCA_cycle)
tricarboxylic acid cycle enzyme complex,
phenylalanyl-tRNA aminoacylation,
fumarate metabolic process,
tricarboxylic acid cycle,
tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
fumarate hydratase activity,
tRNA binding,
Carbon_fixation_pathways_in_prokaryotes
Aminoacyl-tRNA_biosynthesis
Pyruvate_metabolism
Glycolysis_/_Gluconeogenesis
details
CFinderM001775myosin complex,
TBP-class_protein_binding
Fructose_and_mannose_metabolism
Basal_transcription_factors
Amino_sugar_and_nucleotide_sugar_metabolism
motor activity,
details
CFinderM001860Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
Protein_processing_in_endoplasmic_reticulum
dolichyl-diphosphooligosaccharide-protein glycotransferase activity,
GT66 GlycosylTransferases
protein glycosylation,
protein N-linked glycosylation via asparagine,
phenylalanyl-tRNA aminoacylation,
tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
oligosaccharyl transferase activity,
tRNA binding,
ER_membrane_protein_complex
Aminoacyl-tRNA_biosynthesis
endoplasmic reticulum membrane,
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides,
details
CFinderM001892phenylalanyl-tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
WRKY Transcription_Regulator(from PlantTFDB)
tRNA binding,
details
CFinderM001894AGC_NDR (from iTAK)
Golgi apparatus,
membrane coat,
clathrin adaptor complex,
nucleic acid binding,
details
CFinderM001895phenylalanyl-tRNA aminoacylation,
mitochondrial outer membrane,
Aminoacyl-tRNA_biosynthesis
tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
tRNA binding,
details

4.Expression profilings